Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq742 102 2e-16 >seq742 Length=2242023 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| |||| ||||| | ||| Sbjct 1678282 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCTAGCGAC 1678341 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| || || || || Sbjct 1678342 ACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAGCAG 1678401 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| |||||||||| | || || |||| |||||| || Sbjct 1678402 AGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATC 1678461 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||| || || ||||| ||||| Sbjct 1678462 CAGAAAGAATCCACCCTTCATCTTGT 1678487 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || || || || || ||||| | || ||||| |||| Sbjct 1675062 CAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTGGAGCCCAGTGAC 1675121 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| || || || ||||| ||| || || || Sbjct 1675122 ACCATAGAAAATGTTAAAGCTAA-GATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCA 1675180 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||||||||| |||||| |||||||||| | || || | || |||||| | Sbjct 1675181 GAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACAT 1675240 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||| || || || || ||||| Sbjct 1675241 CCAGAAAGAATCCACCCTCCATCTTGT 1675267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175348666599267