Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq299382 98.7 3e-17 seq299383 95.1 4e-16 seq142289 95.1 4e-16 seq53478 95.1 4e-16 seq6872 95.1 4e-16 seq5105 95.1 4e-16 seq4350 95.1 4e-16 seq4014 95.1 4e-16 seq368312 89.7 2e-14 seq329030 89.7 2e-14 seq137531 89.7 2e-14 seq125220 89.7 2e-14 seq86185 89.7 2e-14 seq54575 89.7 2e-14 seq29205 89.7 2e-14 seq21025 89.7 2e-14 seq14800 89.7 2e-14 seq6215 89.7 2e-14 seq1304 89.7 2e-14 seq147021 87.8 6e-14 seq105206 86.0 2e-13 seq319658 84.2 7e-13 seq98385 84.2 7e-13 seq65122 82.4 2e-12 seq323462 80.6 8e-12 seq125245 80.6 8e-12 seq94297 80.6 8e-12 seq30842 80.6 8e-12 >seq299382 Length=1094 Score = 98.7 bits (108), Expect = 3e-17 Identities = 78/90 (87%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 2752 TTTGTACTGTGTT-TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTA 2810 || ||||| |||| |||| | ||| |||||||||||||||||| |||||||||||||||| Sbjct 118 TTAGTACT-TGTTATATGCC-GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTA 175 Query 2811 AAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 || ||||||||||| | |||||| ||| || Sbjct 176 AATGTCCCTGGTTCGATCCCGGGTTTCGGC 205 >seq299383 Length=2141 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 1044 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 985 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 984 CCGGGTTTCGGC 973 >seq142289 Length=330 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| | Sbjct 171 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCAATC 112 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 111 CCTGGTTTCGGC 100 >seq53478 Length=1622 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 1045 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 986 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 985 CCGGGTTTCGGC 974 >seq6872 Length=1161 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 174 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 115 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 114 CCGGGTTTCGGC 103 >seq5105 Length=559325 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 8408 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 8349 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 8348 CCGGGTTTCGGC 8337 >seq4350 Length=4999318 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 4943937 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 4943996 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4943997 CCGGGTTTCGGC 4944008 >seq4014 Length=146300 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 78644 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 78585 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 78584 CCGGGTTTCGGC 78573 >seq368312 Length=359 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 54 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 113 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 114 CCTGGTTTCGGC 125 >seq329030 Length=247 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 136 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 195 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 196 CCTGGTTTCGGC 207 >seq137531 Length=182 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 76 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 17 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 16 CCTGGTTTCGGC 5 >seq125220 Length=112 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| | Sbjct 98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCAATC 39 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 38 ACTGGTTTCGGC 27 >seq86185 Length=706 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 480 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 539 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 540 CCTGGTTTCGGC 551 >seq54575 Length=320 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 178 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 119 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 118 CCTGGTTTCGGC 107 >seq29205 Length=231 Score = 89.7 bits (98), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | ||| Sbjct 3 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATCCCT 62 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 63 GGTTTCGGC 71 >seq21025 Length=122 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| | | Sbjct 33 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAATTGTCCCTGGTTCGATC 92 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 93 CCTGGTTTCGGC 104 >seq14800 Length=188 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||| | | Sbjct 156 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGTAGATCTAAATGTCCCTGGTTCGATC 97 Query 2829 CCGGGCTTCAGC 2840 || ||||| || Sbjct 96 CCTAGCTTCGGC 85 >seq6215 Length=466578 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 259496 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 259555 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 259556 CCTGGTTTCGGC 259567 >seq1304 Length=13350 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||| | Sbjct 5854 GCTGCAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAATGTCCCTGGTTCAATC 5913 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 5914 CCTGGTTTCGGC 5925 Score = 87.8 bits (96), Expect = 6e-14 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 ||| ||| |||| | ||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 5644 TTTTTGG-TGAAATGGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAATGTCCCTGGT 5702 Query 2823 TCAACCCCGGGCTTCAGC 2840 |||| ||| || ||| || Sbjct 5703 TCAATCCCTGGTTTCGGC 5720 Score = 84.2 bits (92), Expect = 7e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | |||||||||||||||| ||||||||||| | | Sbjct 4909 GCCGAAATAGCTCAGTTGGGAGAGCGTAAGACTGAAGATCTAAATGTCCCTGGTTCGATC 4968 Query 2829 CCGGGCTTCAG 2839 || | ||||| Sbjct 4969 CCAGTTTTCAG 4979 >seq147021 Length=197 Score = 87.8 bits (96), Expect = 6e-14 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 88 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 147 Query 2829 CCGGGCTT 2836 || || || Sbjct 148 CCTGGTTT 155 >seq105206 Length=484 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| ||||||||||||||| || ||||||||||| | | Sbjct 145 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAATGTCCCTGGTTCGATC 86 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 85 CTTGGTTTCGGC 74 >seq319658 Length=525 Score = 84.2 bits (92), Expect = 7e-13 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 2763 TTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 |||||| || ||| |||||||||||||||||| | |||||||||||||||| |||||||| Sbjct 90 TTTATGTGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTAAATGTCCCTGG 149 Query 2822 TTC 2824 ||| Sbjct 150 TTC 152 >seq98385 Length=137 Score = 84.2 bits (92), Expect = 7e-13 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | | Sbjct 77 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGAGC 18 Query 2829 CCGG 2832 | || Sbjct 17 CTGG 14 >seq65122 Length=129 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||||| |||||||| ||||||||| ||||||||||| | ||| Sbjct 129 AAATAGCTCAGTTGGGAGAGCGTTAGACTGTAGATCTAAATGTCCCTGGTTCGATCCCTA 70 Query 2833 GCTTCAGC 2840 ||||| || Sbjct 69 GCTTCGGC 62 >seq323462 Length=256 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2777 AGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTT 2836 ||||||||||||||||| |||||||||| ||||||| ||||||||||| | ||| || || Sbjct 233 AGCTCAGTTGGGAGAGCGTTAGACTGAAAATCTAAATGTCCCTGGTTCGATCCCTGGTTT 174 Query 2837 CAGC 2840 | || Sbjct 173 CGGC 170 >seq125245 Length=213 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| | | Sbjct 115 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCAGGTTCGATC 174 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 175 GCTGGTTTCGGC 186 >seq94297 Length=277 Score = 80.6 bits (88), Expect = 8e-12 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || ||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 57 GCCGAAATAGCTCAGTTGGGAGAGCGGTAGACTGAAGATCTAAATGTCCCTGGTTCA 1 >seq30842 Length=183 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| ||||| || ||||||||| ||||||||||| | | Sbjct 33 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGAATGTAGATCTAAATGTCCCTGGTTCGATC 92 Query 2829 CCGGGCTTCAGC 2840 || ||||| || Sbjct 93 CCTAGCTTCGGC 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15775503392415