Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq198807 86.0 3e-12 seq5983 86.0 3e-12 >seq198807 Length=933 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21682 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 21741 |||| | || ||||||||| || |||||| ||||||||||||||||||||||||||| Sbjct 784 CTGCCAGCTGTATCAGCGCTCCGGGGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAG 725 Query 21742 CTACGCGCTGCTGAC 21756 |||||| || ||||| Sbjct 724 CTACGCCCTCCTGAC 710 >seq5983 Length=3405033 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 21682 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 21741 |||| | || ||||||||| || |||||| ||||||||||||||||||||||||||| Sbjct 1577575 CTGCCAGCTGTATCAGCGCTCCGGGGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAG 1577634 Query 21742 CTACGCGCTGCTGAC 21756 |||||| || ||||| Sbjct 1577635 CTACGCCCTCCTGAC 1577649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235066662813521