Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq213072 100 6e-17 >seq213072 Length=511 Score = 100 bits (110), Expect = 6e-17 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 5631 TCCAACTGGTCAGAAAAAACAAtttttttGTTGTCTAATTTAGTGGCAAAGGACCCGTAC 5690 |||| |||||||| |||| |||| |||||| |||| | || |||||||| |||||||| Sbjct 258 TCCATCTGGTCAG-AAAAGCAATCTTTTTG-TGTCAAGCTTGGTGGCAAACGACCCGTAG 315 Query 5691 AGGGCGTTAGATAATAATTTGGCAATGCTCCTCATGGTCTGGTTTTTGTTTTTGTCTGCC 5750 |||||||| || | || ||||| ||| | || ||| ||||||||| || || Sbjct 316 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCG 374 Query 5751 TGTTCTTTGGCCTGGATGTTGAGTTGCACATATTCTCTGGCTAAGCACTTCCACTCTGGA 5810 | || |||||| |||||| || ||||| ||||| | || | |||| ||| || || Sbjct 375 CGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GGG 433 Query 5811 AAGATGATGGT 5821 |||| | |||| Sbjct 434 AAGACGGTGGT 444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101275334790940