Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq2750 127 3e-24 >seq2750 Length=414638 Score = 127 bits (140), Expect = 3e-24 Identities = 227/324 (70%), Gaps = 18/324 (6%) Strand=Plus/Plus Query 13729 AGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCG 13788 || |||||| || ||||| ||| || | ||||| ||||| || |||||| | ||||||| Sbjct 216199 AGGTCGAGAACTTTGAGCGGCTCTTGCGAGCCATATACGCGCCCCAGAACGTGTACTGCG 216258 Query 13789 TCCACGTGGACTCCAAGTCCGGCGACGA--GTT-CATCCGGGGCGTCTCGGCCATCGCCA 13845 |||| || ||| | || || | || | || || ||| | || | |||||| Sbjct 216259 TCCATGTCGACACAAAAGCCAAC-ACTACCGTAGCAGCCGC--CATCGCCAACATCGCTT 216315 Query 13846 GGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACG---ACGTGGTGTACGGCTCCT 13902 || ||||| |||||| | ||| | | | | || | ||||| |||| | || Sbjct 216316 CCTGTTTCCCCAACGTGTTCATGGTCA---GTCAACCCGTGAAAGTGGTCTACGCCAGCT 216372 Query 13903 GGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGG---ACGCCTCCCCCGTCA 13959 ||| || |||||||| ||||||| |||||||||||| ||| ||| | | | | Sbjct 216373 GGATGCGGGTGCAGGCGGACCTCAACTGCATGTCGGATCTGCTGCACGTCAGCACGG--- 216429 Query 13960 AGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGA 14019 |||||| ||| | ||||||| || ||| ||||||||| | ||||||||||| |||| Sbjct 216430 AGTGGAAGTATTTCATCAACCTCTGTGGGCAGGACTTCCCCATGAAGACCAACCTAGAGA 216489 Query 14020 TCGTGCGGGCGCTGAAGGCCCTGG 14043 | ||||||| |||||||| |||| Sbjct 216490 TGGTGCGGGACCTGAAGGCTCTGG 216513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655219663499520