Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq742 149 1e-30 >seq742 Length=2242023 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| ||||||||||| |||| ||||| || | || || | ||||||| Sbjct 1675270 AGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1675211 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || || || || ||||| ||||||||||| Sbjct 1675210 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 1675151 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| ||| |||||||| || ||||| || | ||||| ||| Sbjct 1675150 TGGATCTTAGCTTTAACATTTTCTATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTC 1675091 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||||| Sbjct 1675090 TTGCCAGTCAGGGTTTT 1675074 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| || || ||||||||||| |||| ||||| |||| || || | |||||| Sbjct 1678491 CAGGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 1678432 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || |||||||| || | || || || || || || ||||||||||| Sbjct 1678431 TTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTC 1678372 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| |||||| ||||||||||| | ||||| || | ||||| || Sbjct 1678371 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGT 1678312 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | || || | ||| | ||||| Sbjct 1678311 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1678279 Score = 122 bits (134), Expect = 2e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| || |||||||| |||| ||||| || | || || | ||||||| Sbjct 1667601 AGGACAAGATGGAGGGTCGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1667542 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || || || || || || ||||||||||| Sbjct 1667541 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCC 1667482 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||| ||||||||||| Sbjct 1667481 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC 1667450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186000412074338