Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq272266 273 5e-69 seq213072 205 2e-48 seq256110 122 2e-23 seq295602 80.6 6e-11 >seq272266 Length=497 Score = 273 bits (302), Expect = 5e-69 Identities = 359/493 (73%), Gaps = 11/493 (2%) Strand=Plus/Plus Query 6097 TATCTCGCCGCGCAGCGGCTCGTTGGTCCAGCACAGGCGCCCGCCCTTGCGCGAGCAAAA 6156 || ||| ||||| || |||||||||||||||| ||||| ||||||||||||||||| || Sbjct 3 TACCTCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAA 62 Query 6157 TGGGGGCAGGACGTCTAGCATCTCGTCGTCCGGAGGGTCGGCGTCGATGGTGAAGACCGC 6216 ||| || ||| ||||||| | |||||||| ||||| ||||| | ||| |||||| | Sbjct 63 TGGCGGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCC 122 Query 6217 GGGCAGGAGGTCTGGGTCGAAGTACCCGAGAGGCCCTCCGGCTTTCA--TCTTGCGTTCG 6274 |||||| ||| | ||||||||| | | | ||| || || ||| ||| | Sbjct 123 GGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCC---TTGCAAGTCTAGCGCCTG 179 Query 6275 TAGAC----GCTGACGGCCACCGCGCGGTCGTATGGGTTGAGCGGGTACCCGGCGGGAAA 6330 | | || | |||| | |||||| |||||||||||||| ||| || || | Sbjct 180 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 239 Query 6331 GGGGTGTGTGAGCGCGCTGGCATACATGCCGCAGATGTCGTAGACGTAGACGGGCTCTGA 6390 |||||| ||||||||| ||| ||||||||||| |||||||| |||| || ||||||| Sbjct 240 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGT-GAGGGGCTCTCT 298 Query 6391 GAGCACGCCTATGTAAGTGGGGTAGCATCGGCCGCCGCGGATGCTGGCGCGCACGTACTC 6450 ||| | || | || || |||||||||| || ||||||||||||||||||||||| || Sbjct 299 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATC 358 Query 6451 GTACATCTCGTGGGACGGGGCCAGGAGGGCCTCCCCCAGGTTGTTTTTGTCCGGTCGCTC 6510 ||| | ||||| || || || |||||| | || |||||| | | | || |||| Sbjct 359 GTATAGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAGGTTGCTACGGGCGGGCTGCTC 418 Query 6511 GGCCCTGAATAGGACTTGCTTAAAAATGGCGTGGGAATTGGAACTGATGGTGGGGCGCTG 6570 || | ||| | ||| | || ||||| || || ||||| ||||| || ||||| Sbjct 419 TGCTCGGAA-GCTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTG 477 Query 6571 AAAGACGTTGAAG 6583 |||||||||||| Sbjct 478 GAAGACGTTGAAG 490 >seq213072 Length=511 Score = 205 bits (226), Expect = 2e-48 Identities = 249/330 (75%), Gaps = 12/330 (4%) Strand=Plus/Plus Query 5752 TTCGGCGCAGAGATTTTCTGTCTCTATATAGGAGGAAGATTTGACGCTGTAGACC---CC 5808 ||| |||| ||||| || || || | | | ||||| ||||||| | | ||| || Sbjct 173 TTCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGA---TATTCACCTGGCC 229 Query 5809 GGCGGCGATATCCCTGACGGTGTCCTCTTCCAGGTGGTCAGAAAAGACCGtttttttGTT 5868 |||| ||| | ||| |||| || | |||| |||||||||||| | | ||||||| Sbjct 230 CGCGGTGATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT- 287 Query 5869 GTCCAGCTTGGTGGCGAACGAGCCGTAGAGGGCGTTGGAGAGCAGCTTTGCGATGCTGCG 5928 ||| ||||||||||| ||||| ||||||||||||||||| |||| ||| |||||| ||| Sbjct 288 GTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCG 347 Query 5929 CATGGTTTGGTTCTTTTCTCGGTCGGCCTTCTCTTTGGCCGCGATGTTGAGTTGCACGTA 5988 || ||||||||| ||| | || ||||| ||| |||||||||||||| || |||||||| Sbjct 348 CAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTA 406 Query 5989 CTCTTTGGCTATGCACTTCCATTCTGGAAACACGGTGGTCTTTTCGTCCGGCAGGATGGT 6048 || || | |||| |||||| || || |||||||| ||||| |||| | ||| Sbjct 407 TTCGCGCGCAACGCACCGCCATTC-GGGAAGACGGTGGTGCGCTCGTCGGGCACCA-GGT 464 Query 6049 G-ACGCTCCAGCCGCGGTTGTGTAGCGTGA 6077 | |||| ||| ||||||||||| || |||| Sbjct 465 GCACGCGCCAACCGCGGTTGTGCAGGGTGA 494 >seq256110 Length=496 Score = 122 bits (134), Expect = 2e-23 Identities = 245/360 (68%), Gaps = 5/360 (1%) Strand=Plus/Minus Query 10042 GGGGGAGAGCGAGGGGCTGGTGCGACTCCAGGGCGGCGCCACGACCGAGGGGCACCCCCG 10101 || |||| ||||||| |||| ||| || ||| || || | | ||| ||||||| | Sbjct 359 GGAGGAGGGCGAGGGCCTGGCGCGGCT--AGGAGCGC-CCTCTCCTGAGCGGCACCCAAG 303 Query 10102 GGTGCAGATAAAGCGGGACGCCGCCGAGGCCTTCGTACCGCGCCAGAATGCTTTTAGAGA 10161 ||||||| | ||||| || | ||||| | ||| ||||| ||||| ||| | || Sbjct 302 GGTGCAGCTGAAGCGTGATACGCGTGAGGCGTACGTGCCGCGGCAGAACCTGTTTCGCGA 243 Query 10162 CAACGAGGGAGAGGAGGGCGAGTGCGGGCGGCATCTCCGCTTCGAGGCGGGGCGCGCTCT 10221 | ||||||||||||| |||| |||| ||| ||| | || ||||||| || Sbjct 242 CCGCGAGGGAGAGGAGCCCGAGGAGATGCGGGATCGAAAGTTCCACGCAGGGCGCGAGCT 183 Query 10222 CCGCGAAGGCCTCTCCTCCGACCGGATGCTCACGGAGGCCGACTTCGAAAAGAGCCCCCG 10281 || | ||||| ||| ||| |||| |||| ||||| || | | || Sbjct 182 GCGGCATGGCCTGAATCGCGAGCGGTTGCTGCGCGAGGAGGACTTTGAGCCCGACGCGCG 123 Query 10282 CAGCGGCATCAGCCCCGCGCAGGCCCACATGCGTGCCGCGGACCTGGTGACCGCGTATGA 10341 | ||| || || ||||||| || ||| || ||||| |||||||| ||||| || || Sbjct 122 AACCGGGATTAGTCCCGCGCGCGCACACGTGGCGGCCGCCGACCTGGTAACCGCATACGA 63 Query 10342 GCAGACCGTGAAGGAGGAGGTGAACTTTCAGACGTCTTTTAACAACAACGTGAGGACGCT 10401 |||||| ||||| ||||| | ||||| | | | ||||||||| ||||| | ||||| Sbjct 62 GCAGACGGTGAACCAGGAGATTAACTTCAAAAAG--CTTTAACAACCACGTGCGTACGCT 5 >seq295602 Length=499 Score = 80.6 bits (88), Expect = 6e-11 Identities = 92/124 (74%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 13842 CACCTTCACCTCGTACCGCAGCTGGTACCTGGCCTATAACTACGGGGACAAAAAGACGGG 13901 |||||||||| |||||||||||||||||| || || |||||||| ||| |||| || Sbjct 358 CACCTTCACCCAGTACCGCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGG 417 Query 13902 AGCCTTCGCCTCGACGCTCCTGGTCACCCCGGACATCACCTGCGGGGTAGAGCAGATCTA 13961 | | | | | ||| || || ||| || ||| | |||||||| |||||| |||| Sbjct 418 AATCCGCTCATGGACCCTGCTTTGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTCTA 477 Query 13962 CTGG 13965 |||| Sbjct 478 CTGG 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103956058836648