Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5389 194 2e-44 >seq5389 Length=131951 Score = 194 bits (214), Expect = 2e-44 Identities = 1223/1957 (62%), Gaps = 15/1957 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || |||||| ||||| || | | | || | || || || Sbjct 38099 TTCTTCATCTCCTCGCTCCACAGCCCCCTCTCCGTGAGGTCCTTCAGCATGTGGGGGTTG 38040 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 | || || || ||||| || | || || || ||||| | || ||||| || || || Sbjct 38039 ATGATCTGGAACTCTCCCGAGAGCACCCTGCGGGTGTACAGGTTGCTGGTGTAGGGCTCG 37980 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 37979 ATGGACTCGTTGTTGCCCAGGATCTGTGCCGTGGAGGCGGTGGGCATGGGCGCCAGCAGC 37920 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || || | ||| || || || || ||||| ||||| || Sbjct 37919 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTGAGCAGCTTCCAGTCCCAGAGG 37860 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || || |||| | ||||| || || | || ||||| | | || Sbjct 37859 TCGGTGGGGGTCACGCCCCACATGTCGTACTGCAGCACCCCCTTGCTGACGGGGCAGCCC 37800 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 || || ||||| | ||| || | || | ||||| |||| ||| | ||| || Sbjct 37799 GGGTACGTCTCGTACGGCCCCAGCTCCGCCGCCTGCTCGCAGCTCGACTCCAGCGCCGCG 37740 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 | || || || ||||| || | | | || || || || || | || || || || Sbjct 37739 TGGTAGATGGTCTCGAAGATGTGCCTGTTGAGGAGCTGGGCCTCCGGGCTCTCGAAGGGG 37680 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 || | | || || || || || || || ||||| || || || || ||||| | || Sbjct 37679 TAGCGCATCAGGATGAAGGCGTCGGCCAGGCCCTGCACGCCGATGCCGATAGGCCGGTGC 37620 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| || || | || | || || | ||||| | || | || || || || ||| Sbjct 37619 CGCTTGTTCGACCTCTCGCCCTCCGGCACCGGGTAGAAGTTGACCTCGATGATCTTGTTG 37560 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || || | || | || || ||| || || || || || | | || Sbjct 37559 AGGTTCTTCACGATCACCTTGGTGACGCTGGCCAGCTTCTTGAAGTCGAAGGTGCGCTCG 37500 Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 |||| |||| || || || || || || || || || ||||| ||||| | | Sbjct 37499 GCCGTCACGTACATGTTGAGCGCGATGGAGGCCAGGTTGCACACGGCGACCTCGTCCCCG 37440 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| || | || ||||||||||| || || || ||||||| || || || || Sbjct 37439 CTGGTGTACTCGATGATCTCCGTGCACAGGTTGCTGGACTTGATGCAGCCCAGGTTCTGC 37380 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 ||||||||||| ||| || | |||||| || || | | || || || || || || Sbjct 37379 TGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCCCGTCTCCGTC 37320 Query 76433 TGTGATTCGATAATAGATTTCCAGACGA-CTCTAGCTTTTATTATA-GATTTGTATCGCT 76490 || || ||||| || | | ||| || || | || || | | | || | | || Sbjct 37319 TGCGACTCGATGATGGCGTGCCACACCTGCTGT-GCCTTCACCACGCGCTTGGCCTTGCC 37261 Query 76491 TCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAAC 76550 | | | | || || || | | ||||| || || ||||| || |||| | Sbjct 37260 CGCCGCCT-CGTAGCCGGTGTACAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCC 37202 Query 76551 CAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAA 76610 | || || || || || ||||||| ||||| || | || |||| ||||| | Sbjct 37201 CGGGGCAGTCGTTGGGGCACATCAGGGACCATTCCTGGTTGGACTCCACCCTCTTCATGA 37142 Query 76611 AGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 | || || || ||||| | || || || || || |||| | | || || || || Sbjct 37141 ACAGGTCGGGGATCCACAT-GCCGTAGAACAGGTCGCGGGCGCGCTGCTCCTCCTTGCCC 37083 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 || ||||| || || || |||||||| | | || | ||||| || || || || || Sbjct 37082 GTGTTCTTCTTCAGCTCCAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCCAGGTACATG 37023 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | || || || || || || ||||| || | || | || ||||| || || Sbjct 37022 GCGAAGGCCCCGGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTAC 36963 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | || ||| || | | |||||| || | || || || || | || || || || Sbjct 36962 ACGCGCAGCATGGGCACCAGGCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCC 36903 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 || || || || | | | ||| || || || ||| || ||||| || || Sbjct 36902 GTGGCGCGGATGCAGCTCACCGCCACGCCGATGCCGCCCGCCGACTTGGAGATGAGCGCG 36843 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || | || | ||||| ||||||||||| || || || ||| ||||| || || || Sbjct 36842 CACTGCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAG 36783 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 ||||| | || | | || || || || |||| || || || || || ||| Sbjct 36782 CAGCTGCTGAGCTGCGGTCGGTTGGTGCCGGCGTTGAACAGCGTGGGCGAGGCGTGCGTG 36723 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089 ||||| || || || || || ||||| || || | | || || || |||| | || Sbjct 36722 AACCACTTCTCCGACAGCAGGTTGTACGTCTCCACGGCGGCGTCGATGTCCCTCTTGTGG 36663 Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149 || || || || || | ||||| ||| ||||| || || || | ||| || || Sbjct 36662 ATGCCCACCGCCACCCTCATCAGCATGTGCTGCGGCCGCTCCGCCACCTTGCCGTTGATC 36603 Query 77150 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTT 77209 |||| || ||| || |||| || || || || || ||||||| || ||||| | Sbjct 36602 TTCAGCAGGTACGAGCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTAGGAGAAGTCGCGG 36543 Query 77210 TCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCA---TGACA 77266 ||| | || || | || || || |||||| | | || || || |||| | | Sbjct 36542 TCGAAGATGATGGCGGAGTTGAGGCGGTCCTTGTTGTCCGTGACGATGTCCAGCGTCTCC 36483 Query 77267 GTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCT 77326 || || || || || || | || || || || || ||| | | | ||| Sbjct 36482 TTG---GAGATCATGGGCGAGTGGCGGCCGTTGAGCGGGTTGACGTAGCTGTAGAGGTCC 36426 Query 77327 TCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTA 77386 ||||| |||||||| || | || || || |||||||| || || || ||||| || | Sbjct 36425 TCCATCACGTCGCTGAACACCTTCTTGGTCTCCTTGTGGAGGTTGGAGACGGCGATGCGG 36366 Query 77387 GCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCT 77446 || || || || ||||| || || | || ||| ||||| | || || ||||| Sbjct 36365 GCGGCCAGGCAGGCGTAGTCGGGGTGCTTGGTGGTGAGCGTGGCCGTGATCTCGGCCGCC 36306 Query 77447 AAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCT 77506 | || || | || | || || || ||| | || ||||| || || || ||||||| Sbjct 36305 AGCGTGTCCAGCTCCACCGTGGTCACGCCGCTGTACAGCCCCTGGATCACCTTCATGGTG 36246 Query 77507 ATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATACGAGAT 77566 || | | | || || || || || ||||||| || || || | || || || || Sbjct 36245 ATCTGGGTCGGGTCCACGAAGTCCGTGTTCAGCCCGTAGCACAGCTTCTGGATGCGGGAC 36186 Query 77567 GTGATTTTATCAAACATGACATTCTCCTTACATCCAT 77603 ||||| || || ||||||| ||||| | ||||| Sbjct 36185 GTGATCTTGTCGAACATGATGCGCTCCTGGCGTCCAT 36149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709125307352640