Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq742 140 7e-28 >seq742 Length=2242023 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||||||||| || || ||||| ||||||||||| |||| | || | ||||||| Sbjct 1678490 AGGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1678431 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| ||||||||||| || | | ||| |||||||| || Sbjct 1678430 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCC 1678371 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | | |||| | ||| || || || || || || Sbjct 1678370 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTC 1678311 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 1678310 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1678279 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || || ||||| ||||||||||| || | | || | ||||||| Sbjct 1675270 AGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1675211 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| ||||||||||| || | | || |||||||| || Sbjct 1675210 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 1675151 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| | |||| | |||| ||| ||| || ||||| || || Sbjct 1675150 TGGATCTTAGCTTTAACATTTTCTATGGTGTC---ACTGGGCTCCACCTCAAGGGTGATG 1675094 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || || || || |||| |||||| Sbjct 1675093 GTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 1675059 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || || ||||| ||||||||||| || | | || | ||||||| Sbjct 1667601 AGGACAAGATGGAGGGTCGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1667542 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| ||||||||||| || | | ||| |||||||| || Sbjct 1667541 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCC 1667482 Query 152013 TGAATTTT 152020 || || || Sbjct 1667481 TGGATCTT 1667474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147502006035517