Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq213072 271 2e-68 seq272266 235 1e-57 seq256110 210 5e-50 seq295602 98.7 2e-16 >seq213072 Length=511 Score = 271 bits (300), Expect = 2e-68 Identities = 269/341 (79%), Gaps = 8/341 (2%) Strand=Plus/Plus Query 5912 TGCGCTGAGGTTGTCAGTTTCTATGTACGAGGAGGATTTGACACGCAGGGTACCCGCGGC 5971 |||||| || ||||||||||| | ||||||||||||||| | || ||||||| Sbjct 176 TGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCGGT 235 Query 5972 TATGCCGTTCAGATGCTTGGGGC--CCATCTGGTCAGAAAACACAATCTGCTTGTTGTCC 6029 ||||| || || | | | || |||||||||||||||| |||||| |||| ||| Sbjct 236 GATGCCTTTGAG--GGTGGCCGCATCCATCTGGTCAGAAAAG-CAATCTTTTTGT-GTCA 291 Query 6030 AACTTGGTAGCGAACGACCCGTAGAGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCTGC 6089 | |||||| || ||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct 292 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 351 Query 6090 GTCTGGTTCTTTTCGCGGTCGGCCTTTTCCTTGGCCGCGATGTTGAGCTGGACGTACTCT 6149 || ||||| ||| |||| ||||| ||||||||||||||||| ||||| ||||| || Sbjct 352 GTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 410 Query 6150 CTGGCCACGCACTTCCATCCCGGGAAGACGGTGGTCCTCTCGTCCGGCACCAGTCGCACT 6209 | || |||||| |||| ||||||||||||||| | |||||| |||||||| |||| Sbjct 411 CGCGCAACGCACCGCCAT-TCGGGAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 469 Query 6210 CCCCAGCCGCGGTTGTGGAGGGTGATGACGTCGATGCTGGT 6250 | ||| ||||||||||| ||||||| | ||| | |||||| Sbjct 470 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGT 510 >seq272266 Length=497 Score = 235 bits (260), Expect = 1e-57 Identities = 351/491 (71%), Gaps = 9/491 (2%) Strand=Plus/Plus Query 6255 ACCTCGCCCCTTAGCGGCTCGTTCGTCCAGCACAGGCGTCCTCCTTTGCGGGAGCAAAAA 6314 ||||| || | ||| ||||||| |||||||| ||||| || || ||||| ||||| || Sbjct 4 ACCTCTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAAT 63 Query 6315 GGGGGCAGCACGTCCAACATGGACTCGTCAGGGGGGTCGGCGTCGATGGTAAAAATTCCT 6374 || || || ||| | | | |||||| |||||||| ||||| | |||||| | || Sbjct 64 GGCGGTAGGGGGTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCG 123 Query 6375 GGCAGCAGAGAAGGATGAAAGTAGTCGATGT--CCTCCTGCCGCGAC-AGGGCCTTCTCC 6431 |||||||| | | |||||||| || | | |||| | | | || |||| || | Sbjct 124 GGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCAAGTCTAGCGCCTGCTGC 183 Query 6432 CATTCGTGCACGGCCAGGGCCCGCTCGTAGGGACTCAGGGGCGCCCCCCACGGCATGGGG 6491 ||| || | |||| || || |||||||| || | || || | ||||| ||||||||| Sbjct 184 CATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGG 243 Query 6492 TGTGTCAGCGCCGAAGCATACATCCCGCAGATGTCATACACGTACAGGGGCTCGCGGAGG 6551 || || ||||| || || ||||| ||||| ||||| || |||| |||||||| | ||| Sbjct 244 TGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGT-GAGGGGCTCTCTGAGT 302 Query 6552 ACGCCCATGTAGGTGGGGTAACAGCGCCCCCCTCTGATGCTGGCCCGCACGTAATCGTAC 6611 | || | || || ||||| || | || || | ||||||||| |||||||||||||| Sbjct 303 ATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTAT 362 Query 6612 AGTTCGTGGGAGGGGGCTAGCAGGTGACTGCTGAGCTGGGGCTTCTG--CGGTTTTTCCG 6669 |||||||| ||||| || || |||| | ||| | ||| | | || | || | Sbjct 363 AGTTCGTGCGAGGGAGCGAGGAGGTCGGGACCGAG--GTTGCTACGGGCGGGCTGCTCTG 420 Query 6670 CCCTGAACACGATCTGCCGAAAGATGGCGTGAGAGTTGGAAGAGATGGTGGGCCTCTGAA 6729 | | ||| | ||||||| |||||||| || |||||||| || ||||| || | ||| | Sbjct 421 CTCGGAA-GCTATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGGA 479 Query 6730 AGATGTTAAAG 6740 ||| ||| ||| Sbjct 480 AGACGTTGAAG 490 >seq256110 Length=496 Score = 210 bits (232), Expect = 5e-50 Identities = 266/365 (73%), Gaps = 2/365 (1%) Strand=Plus/Minus Query 10543 CTCGACCTGGAAGAGGGACAGGGGCTAGCTAGACTCGGCGCCGCGACGCCCGAGCGCCAT 10602 || ||| |||| ||||| |||| || || | || || || | | || ||||| || Sbjct 367 CTGGACTTGGAGGAGGGCGAGGGCCTGGCGCGGCTAGGAGCGCCCTCTCCTGAGCGGCAC 308 Query 10603 CCGCGGGTGGCGATGAAACGCGACGCGGCCGAGGCCTACGTTCCCCGGAGCAACTTGTTT 10662 || ||||| | |||| || || || ||||| ||||| || ||| ||| ||||| Sbjct 307 CCAAGGGTGCAGCTGAAGCGTGATACGCGTGAGGCGTACGTGCCGCGGCAGAACCTGTTT 248 Query 10663 CGGGACCGCGGCGGCGAGGAGGCCGAGGAGATGCGGGACTTGCGGTTCAGGGCGGGAAGG 10722 || ||||||| || |||||| |||||||||||||||| |||| || || | Sbjct 247 CGCGACCGCGAGGGAGAGGAGCCCGAGGAGATGCGGGATCGAAAGTTCCACGCAGGGCGC 188 Query 10723 GAGTTGCGACACGGTCTTGACCGACAGCGGTTGTTGAGGGAGGAAGATTTTGAGGTGGAC 10782 ||| |||| || || || | || |||||||| || | ||||| || |||||| ||| Sbjct 187 GAGCTGCGGCATGGCCTGAATCGCGAGCGGTTGCTGCGCGAGGAGGACTTTGAGCCCGAC 128 Query 10783 GAAAAGACGGGCGTCAGTCCCGCGCGCGCACACGTGGCTGCGGCCAACCTGGTCAGCGCG 10842 | || || | ||||||||||||||||||||||| || ||| ||||||| | ||| Sbjct 127 GCGCGAACCGGGATTAGTCCCGCGCGCGCACACGTGGCGGCCGCCGACCTGGTAACCGCA 68 Query 10843 TACGAGCAGACGGTGAAGGAGGAGATGAACTTCCAAAAGAGCTTTAACCACCACGTCCGC 10902 ||||||||||||||||| ||||||| |||||| ||| ||||||||| ||||||| || Sbjct 67 TACGAGCAGACGGTGAACCAGGAGATTAACTTC--AAAAAGCTTTAACAACCACGTGCGT 10 Query 10903 ACCCT 10907 || || Sbjct 9 ACGCT 5 >seq295602 Length=499 Score = 98.7 bits (108), Expect = 2e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 14423 TACCGCAGCTGGTACCTGGCCTACAATTACGGGGACGGCGAGAAGGGCGTGCGGTCGTGG 14482 ||||||||||||||||| || ||||| ||||| ||| ||| || | || || ||| Sbjct 371 TACCGCAGCTGGTACCTTGCATACAACTACGGCGACCCTCAGACCGGAATCCGCTCATGG 430 Query 14483 ACGCTGCTGACGACTCCGGACGTGACCTGCGGCGCTGAACAGGTGTACTGGTCGTTGCC 14541 || ||||| ||||| ||||| ||||||||| | || ||||| |||||||||||||| Sbjct 431 ACCCTGCTTTGCACTCCTGACGTAACCTGCGGCTCGGAGCAGGTCTACTGGTCGTTGCC 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106732295615576