Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq418216 165 8e-36 seq233404 156 4e-33 seq233405 149 6e-31 >seq418216 Length=128 Score = 165 bits (182), Expect = 8e-36 Identities = 114/128 (89%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 8433 CAGCCTCCAGAGTAGCTGGGATTACAGGCAAA-AGCCACCACGCCAAGCTAATTTTTGTA 8491 ||||||| |||||||||||| |||||| | |||||||| | | |||||||||||||| Sbjct 128 CAGCCTCTCGAGTAGCTGGGACTACAGGTGCACAGCCACCATGTCCAGCTAATTTTTGTA 69 Query 8492 TTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA 8551 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 68 TTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCA 9 Query 8552 TGTGATCC 8559 | ||||| Sbjct 8 AGCGATCC 1 >seq233404 Length=146 Score = 156 bits (172), Expect = 4e-33 Identities = 112/128 (88%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||||||||||||||||||| |||||||||| |||| | |||| ||||||| |||| Sbjct 126 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGACAGGATGGTCTCAGTCTCC 67 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 ||| ||| || |||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct 66 TGAACTC--GTAATCCACCTGCCTCGGCCTCCTAAAGTGCTGCGATTACAGGCGTGAGCC 9 Query 8604 ACCGCGCC 8611 |||||||| Sbjct 8 ACCGCGCC 1 >seq233405 Length=142 Score = 149 bits (164), Expect = 6e-31 Identities = 106/119 (89%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 13 TCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCG 72 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCC-AGAGTAGCTGGGATTACAGGC 8461 ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||| Sbjct 73 CCTCCTGGGTTCACGC-ATTCTCCTGCCTCAGCCTCCTCGAGTAGCTGGGACTACAGGC 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518701774357800