Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq742 149 4e-31 >seq742 Length=2242023 Score = 149 bits (164), Expect = 4e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || || || ||||| ||| || || ||||||||||| |||| Sbjct 1678505 CCTCCCCTCAGACGCAGGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1678446 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| ||||| ||||||| | ||||||||||| || Sbjct 1678445 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGG 1678386 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| ||||| |||| | ||||||||| | ||||| Sbjct 1678385 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTGTCGCTAGGCTCCAC 1678327 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || || ||||| || ||||||||||| |||||||| |||||| Sbjct 1678326 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 1678278 Score = 118 bits (130), Expect = 8e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | || || || || ||| || || ||||||||||| || | Sbjct 1675285 CCACCCCTCAGACGAAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 1675226 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| ||||| ||||||| | ||||||||||| || Sbjct 1675225 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 1675166 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| |||| || || |||||||||| || ||||| Sbjct 1675165 ATGCCTTCCTTGTCCTGGATCTT-AGCTTTAACATTTTCTATGGTGTCACTGGGCTCCAC 1675107 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| | || || ||||| || || ||||| || || ||||| |||||| Sbjct 1675106 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCATG 1675058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || ||||||||||| || | || |||| | || ||||||||||| ||||| ||| Sbjct 1667580 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAAG 1667521 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| | ||||||||||| || | |||||||| ||| ||||| |||| | ||| Sbjct 1667520 ATCAGCCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTT 1667462 Query 44267 C-CTATGGTGTCG 44278 | | ||||||||| Sbjct 1667461 CTCGATGGTGTCG 1667449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358115114046459