Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1588 84.2 2e-11 >seq1588 Length=254443 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 118151 GTAAAAGGCGATACACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATA 118210 ||| ||| |||||| | || | | ||| || | || || || || ||| || || Sbjct 75743 GTAGAAGAGGATACAGTGGGAGATCTCTCCATCTCTGCCAGCTCTCCCCGACTCCTGGTA 75684 Query 118211 ATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTATC 118270 ||||| |||| || || |||| |||| || ||||| | ||||||||||| || || Sbjct 75683 GTAACCCTCCACCGACTTAGGCAGACTGGCGTGGATCACATAACGCACGTCGGGCTTGTC 75624 Query 118271 GATGCCCATCCCGAACGCTATCGTCGAACATATCAC 118306 ||||||||| ||||||||||| || | ||| || || Sbjct 75623 GATGCCCATGCCGAACGCTATGGTGGCACAGATGAC 75588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381693901520808