Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10779 86.0 2e-11 >seq10779 Length=91267 Score = 86.0 bits (94), Expect = 2e-11 Identities = 104/139 (75%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTG-TAAGCATCAGATGCGTCATATA 251461 ||| || || |||||| ||||||||||| || ||| || | |||||| || ||| | | Sbjct 53840 GGCCATCAGTCCACACAGGTTACACACATGAAC-CTGATACGGATCAGAAGCTTCAAACA 53782 Query 251462 GCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCAC 251521 | || |||| ||| ||| || ||||||| |||| ||| ||||||||||| || | Sbjct 53781 GACGCTCCTTCAGGAACTGAGCCGCTCCGTGTGCAATCTGACAGTCACGCTCCATCTCCC 53722 Query 251522 CGAAACGAAGACCACCATC 251540 |||| || || |||||||| Sbjct 53721 CGAAGCGCAGGCCACCATC 53703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471497830608509