Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11064 131 1e-25 >seq11064 Length=68724 Score = 131 bits (144), Expect = 1e-25 Identities = 132/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | |||||| |||||| Sbjct 60573 AGGTCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 60514 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| | |||||||| |||||||||||| | || ||||||||| Sbjct 60513 AGCATGTCCTGCAGCTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGGTCGTTTTTG 60454 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| || |||| Sbjct 60453 CTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTTGGGT 60402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412756280735801