Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq3767 109 5e-19 >seq3767 Length=45294 Score = 109 bits (120), Expect = 5e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | ||||| ||| | || |||| || ||| |||||| ||||| Sbjct 36617 AGTATCTGGGGTCCGACATGCGACGGCCTTGACCGCATCGTGGAGCAGTGTGACCTGCCT 36676 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || |||||||||||||| | ||||| ||||||||||| |||| | ||| | Sbjct 36677 GACCTGCAGGTGGGCGACTGGCTGGTCTTTGACAACATGGGCGCCTACACCGTGGCTGCC 36736 Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 || || ||||| |||||||||| || ||||| | |||| || || || Sbjct 36737 TCCTCCACCTTCAACGGCTTCCAGAAACCAGACATCTACTACGTCATGTC 36786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463447345715760