Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq3685 100 4e-16 >seq3685 Length=125217 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| | || || || || ||||| || || ||||| |||| | | | ||| | Sbjct 21279 AGATCCTGGATGGAGAGGTGTACCCACCAACAGTCAAAGAGGTAGGCGCCGAAATGCACT 21220 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || ||| ||||||||| || || || |||| ||||| || || || | Sbjct 21219 ACCCTCCCCACGTTCCCGACTCTCACCGCTTTGCTGTGGGCCACGAGGCCTTCGGCCTGG 21160 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 | ||||| | ||| ||||||||| ||||||||||| || |||||||| || || || | Sbjct 21159 TCCCCGGGCTGATGATGTACGCCACCATCTGGCTGAGGGAACACAACAGAGTGTGTGATG 21100 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||||| | | |||||||| ||| |||||||| ||| ||||||| Sbjct 21099 TGCTGAAGGAGGTTCACCCGGACTGGGACGACGAAAGGCTCTTCCAGA 21052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723187478875680