Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1046 120 4e-22 >seq1046 Length=17845 Score = 120 bits (132), Expect = 4e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| |||||| ||||| |||||||| || || || ||||| || || | || |||| Sbjct 6439 GAGCTCTGTGGTGGTATTTCATCTCTAAGGGCATTGAGTATCTGGACACGGTGTTTTTCA 6380 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | |||| || ||||| ||||| |||| || ||||| || |||||||| | ||||||| Sbjct 6379 TCCTGAGGAAAAAATTCAACCAGGTTACTTTCTTGCATGTCTACCACCACTGCACCATGT 6320 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | ||| | | ||||| || || |||||| | |||||||||||| Sbjct 6319 TCACTCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 6276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603052948289680