Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gasterosteus_20aculeatus_20[genbank_20GCA_5F000180675.1_202006-02- 01] 16,957 sequences; 446,610,788 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq9580 93.3 2e-14 >seq9580 Length=8214 Score = 93.3 bits (102), Expect = 2e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1193 GACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGAC 1252 |||||| | |||||| || | ||| |||||| | ||| ||| | ||||| |||| Sbjct 6801 GACCTCCCCCTCATGGCGCTGCCCCCCTGCCACGCCCTGTGTCAGTTCTACGTGTGCGAC 6742 Query 1253 GGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTC 1312 ||| ||| ||| ||| | ||||||||| | |||||| |||||| ||||| ||| Sbjct 6741 GGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGCGACATGGGCCTCGGGGTGCCCTTC 6682 Query 1313 AATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCA 1353 ||||||||| |||||||| ||| | ||||| |||| || Sbjct 6681 AATATCGCCAGCTACGCGCTGCTCACCTACATGATCGCACA 6641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296070000508257