Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq50 84.2 2e-11 >seq50 Length=2598561 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGTGAATTATC 19030 |||| || || || || ||| | | || ||||| ||||| ||| | ||| || | || Sbjct 118073 ATGGCGCTGCCCCCCTGCCACGCACTCTGCCAGTTCTACGTGTGCGA-CGGCGAGCTGTC 118131 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || | |||||| | || | |||||||| | ||||| || |||||||| || | Sbjct 118132 GTGTCAGCTGTACCAGCGCTCAGCTGATATGGGATTAGGGGTGCCTTTCAACATCGCCAG 118191 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 ||| |||||||||||||||| | || || |||||||||| || Sbjct 118192 CTATTCACTTCTTACCTACATGATTGCACACATTACAGGACTCAA 118236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399465043491045