Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq50 140 4e-28 >seq50 Length=2598561 Score = 140 bits (154), Expect = 4e-28 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || || | ||| || | ||||||||| || || || |||||||| |||||||| Sbjct 118237 CTTGAGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAA 118178 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| | ||||| || | ||||||||||||||||| || || ||||| ||| | Sbjct 118177 AGGCACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 118118 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||||||||||| || ||||||||| ||||| ||||| Sbjct 118117 GCACACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 118073 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 ||||||||||||| |||||||| || |||| ||| |||||||| || ||||| || |||| Sbjct 117159 CCCTGATGAACCACAGCAGCTCCTCAAGGATCCCTCTCCAGAACACTCTCTTTGTTGTCA 117100 Query 146258 GCAGGGGGAACTGG 146271 |||||| |||||| Sbjct 117099 ACAGGGGAAACTGG 117086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590017784944040