Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq304 131 2e-25 >seq304 Length=735388 Score = 131 bits (144), Expect = 2e-25 Identities = 185/256 (72%), Gaps = 8/256 (3%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | |||||| || |||| || |||| Sbjct 470333 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCACACCGGGCTCCAGATGATCAGCTT 470274 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 ||||||| ||| || | | ||||||||| || | || || | | || | ||| Sbjct 470273 GGGGTCGGTCATCAGAGACGTTGCGTCGTCGCTGGGTGTTGGAAG--CTTGTCCTTCAGG 470216 Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318 || || || || | || || |||| | |||| || || |||||| |||||| || Sbjct 470215 AACGCAAACAGGAGGTGGGCGTCCTTCC--CGTTCACGTCCATCTTCTCAAAGAGCTGAA 470158 Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378 | || ||||||||||| || ||||||||||| | |||||| || | | |||||| ||| Sbjct 470157 ACTTGGGCTCGAAGCCATTTCCAGGACGGACATACTTCAGCGACAGGAGGATCTCTTCAT 470098 Query 83379 TCTGGGCGTTTTCCTG 83394 ||| | ||| ||||| Sbjct 470097 TCTTGCAGTTCTCCTG 470082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608735912710040