Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq50 96.9 3e-15 >seq50 Length=2598561 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || || | ||| || |||| || || || || | |||||||||||||| || || Sbjct 118233 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 118174 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 ||||| | ||||| || || || | |||||||||||| || |||||||| || | Sbjct 118173 ACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 118114 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGC 21166 ||||| ||||| || | |||| || || || || ||||||| | |||||| || Sbjct 118113 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCATCCTAGGGAGGTCTGC 118058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427734286626480