Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq113 150 3e-31 >seq113 Length=1687717 Score = 150 bits (166), Expect = 3e-31 Identities = 331/492 (67%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||| | || ||||| | ||| | ||| |||| || |||||| || Sbjct 900984 CAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGAT 900925 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| | ||| || || ||| | || || ||| |||||||||||| Sbjct 900924 GTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGCCAGGGAC 900865 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 |||| || || || ||| | || || | ||||||||||| || ||| ||| | Sbjct 900864 CTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACGAAG-- 900807 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 ||||| ||| ||||| || | | | ||||| ||| || |||||||| || ||| Sbjct 900806 -ACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAG 900748 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCG---AT 97169 ||||| | ||||| || ||| | ||||| || |||| || || | | Sbjct 900747 TTTGAAGAACTCTACACCAGATATGAGAAGGAGGG--GA-GGGTGAAGCGTGTGGTGAAG 900691 Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 || | | || ||| | || ||| | | | ||| ||| || || || |||||||| Sbjct 900690 GCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATG 900631 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 ||||||| ||| || || | || |||||||| | | |||||||||||||| || Sbjct 900630 GTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGC 900571 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||| || ||||||||||| || |||||| | ||||||| ||| |||||| | Sbjct 900570 AGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGCAAT 900511 Query 97350 CTGGCATCGGTC 97361 ||||| || ||| Sbjct 900510 CTGGCCTCTGTC 900499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740985084816760