Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq113 116 3e-21 >seq113 Length=1687717 Score = 116 bits (128), Expect = 3e-21 Identities = 191/271 (70%), Gaps = 7/271 (3%) Strand=Plus/Plus Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTAT 129639 || |||||||||||||| |||| ||||| || ||| |||| | | ||| || ||| || Sbjct 900386 GGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGAT 900445 Query 129640 TTTAACATTTCAAAATTGTAC-TCGCCTACATCGATGTCG-ACAAATTGATTGACACAAA 129697 || ||| ||| | || || || || | || || ||| |||| | ||| Sbjct 900446 GCCAATTTTTTAAAGTCATAAGTCCGCT-CAGGGGTGACGTACATGTTGAGAGCGACA-- 900502 Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757 ||||||| |||||| || || |||| ||| | |||||||||| ||||| | || Sbjct 900503 --GAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGC 900560 Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817 | | || || || |||||||||| || || || || || ||| ||||||| |||| Sbjct 900561 AGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCAT 900620 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 ||||||| | |||||||||||| || ||||| Sbjct 900621 CTTTGTAGACCATGTACGGCGTCCCGGTTTC 900651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419687071404565