Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2861 87.8 3e-12 seq230 87.8 3e-12 >seq2861 Length=8583 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| |||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 7218 CATCACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 7159 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 ||||| ||| ||||||||||||||| |||||||| Sbjct 7158 CAGGGAGATGTTCTCCATGAAGTCAAAAGGGTTCTC 7123 >seq230 Length=973959 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| |||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 823281 CATCACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 823222 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 ||||| ||| ||||||||||||||| |||||||| Sbjct 823221 CAGGGAGATGTTCTCCATGAAGTCAAAAGGGTTCTC 823186 Score = 87.8 bits (96), Expect = 3e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| |||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 831728 CATCACGCCCATCCTCTGGTACTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 831787 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 ||||| ||| ||||||||||||||| |||||||| Sbjct 831788 CAGGGAGATGTTCTCCATGAAGTCAAAAGGGTTCTC 831823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921530226239720