Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq113 123 2e-23 >seq113 Length=1687717 Score = 123 bits (136), Expect = 2e-23 Identities = 482/741 (65%), Gaps = 34/741 (5%) Strand=Plus/Plus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122 ||||||| | ||||||||| || | ||| || || | || | |||||| ||| | | Sbjct 899931 GGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGG 899990 Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182 ||||| ||||||||||| || || ||||| || || | || || ||||| | || Sbjct 899991 CCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACA 900050 Query 146183 CCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCC---GTAGTTTGGACCAAT 146239 ||||| ||| |||||||| ||| | ||||| ||| | || || ||| | Sbjct 900051 GCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTT---CCAGT 900107 Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACA 146299 ||||| | ||||| || | | | ||||||| || | | |||| || Sbjct 900108 CCCACA---GGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCA 900164 Query 146300 GGGGGCTATTCT-CGTACGATTCATAAGGACCGTCGATCTT-GGCCAGTTCGCAGCTAGC 146357 || | | || |||||| || || | || | || |||||| |||||||| || Sbjct 900165 CCGG-CGAGCCTTCGTACGTCTCGTAGGTGCCAA-GCTCGGCGGCCAGCTCGCAGCTCGC 900222 Query 146358 TTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCT 146416 ||||| ||| | | | || || ||||| |||| | ||||| || || ||||| Sbjct 900223 TTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGA-GCAGTTGAGCCTCGG 900281 Query 146417 CGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACA 146475 ||| || |||| ||| || | ||| | ||||| || || | ||||| | ||||| Sbjct 900282 GGCTTTCAAAGGG-ATAACGCATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATT 900340 Query 146476 CCAACGGGGCGGTGTTTCTTGTTA---CTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTG 146532 || | || | ||| | |||| || | || | || | | | |||| |||| Sbjct 900341 CCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGG---TAGTAGTTG 900397 Query 146533 CTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACA 146592 ||||||| | |||||| | || | || | | ||| |||| ||| | || | Sbjct 900398 ATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACG-GATGC--CA----A 900450 Query 146593 TAGTCAAATGTTTTAGTT----TTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAA 146648 | | || || || | | | | ||||| || |||||| |||| |||||||| Sbjct 900451 TTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGACAGAGGCCAG 900510 Query 146649 GTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCT 146708 || || || || |||||||||| |||| || || || | |||||||||||| Sbjct 900511 ATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCT 900570 Query 146709 GCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAG 146768 |||||||||| |||||| ||| | ||||| || | ||||||||| || ||||||| Sbjct 900571 GCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGAC 900630 Query 146769 CATGTACGGTCCCCCGGTTTC 146789 ||||||||| ||||||||| Sbjct 900631 CATGTACGGCGTCCCGGTTTC 900651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475453243976240