Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 2e-14 seq661 89.7 1e-12 >seq7 Length=5262727 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198 ||||||| ||| | ||||||||||| || || ||||| | |||| | | || || || Sbjct 248515 GATAGCCTCAGCTCTTTGGTGGTACTACATCTCCAAAGGAGTGGAATTCCTGGACACTGT 248456 Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258 ||||||||||| ||||| ||||| || || || || || | ||||| || ||||| | Sbjct 248455 CTTTTTCATACTGAGGAAGAAGTTCAACCAAGTCAGCTTCCTCCACGTCTACCATCACTG 248396 Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAA 60310 || ||||| | | | ||| | || || |||||| || |||| || ||| Sbjct 248395 CACCATGTTCATCCTCTGGTGGATTGGAATCAAATGGGTTCCCGGTGGACAA 248344 >seq661 Length=269800 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || || |||||||| || ||||||||||| || ||| | || || || || Sbjct 79197 CCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTGTCACTGGGCTCCACCTCA 79138 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| || ||||||||||| || || |||||||| Sbjct 79137 AGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 79094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981726550132339