Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 6e-15 >seq7 Length=5262727 Score = 96.9 bits (106), Expect = 6e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 ||||||| ||| | ||||||||||| || || ||||| | |||| | | || || || Sbjct 248515 GATAGCCTCAGCTCTTTGGTGGTACTACATCTCCAAAGGAGTGGAATTCCTGGACACTGT 248456 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||||||||||| ||||| ||||| || || || ||||| || ||||| || ||||| | Sbjct 248455 CTTTTTCATACTGAGGAAGAAGTTCAACCAAGTCAGCTTCCTCCACGTCTACCATCACTG 248396 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || ||||| | | | ||| | || || |||||| || | || || || Sbjct 248395 CACCATGTTCATCCTCTGGTGGATTGGAATCAAATGGGTTCCCGGTGGACA 248345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903320847587360