Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq113 194 2e-44 >seq113 Length=1687717 Score = 194 bits (214), Expect = 2e-44 Identities = 561/853 (66%), Gaps = 19/853 (2%) Strand=Plus/Plus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCA--GCATCTGTAAACTCGACGATTTCCGTGC 80965 || ||||||||||| || |||||||| || || |||| ||||||||||||||||| Sbjct 900503 GAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTA--CTCGACGATTTCCGTGC 900560 Query 80966 ACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025 | | || |||| || || ||||| || | |||||| ||| |||||| || | Sbjct 900561 AGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCAT 900620 Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085 | |||||| ||||||||| || ||||| || ||| |||| || ||| || | ||| | Sbjct 900621 CTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCATA 900680 Query 81086 TCTCGCGCGCCTTGACCAC---CTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142 || | ||||| ||||| ||| | | || || | |||| ||| ||| Sbjct 900681 GCTGCTGAGCCTTCACCACACGCTT---CACCCTCCCCTCCTTCTCATATCTGGTGTAGA 900737 Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202 ||| || |||| | || ||| || | ||||| ||| || ||||||| Sbjct 900738 GTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCA 900797 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 || |||||| || |||||| || ||||||||| |||||||||||| |||||| Sbjct 900798 GGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGT 900857 Query 81263 TGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 ||||||||| | | ||| |||||| | ||| ||| || ||| || |||| Sbjct 900858 AGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGT 900917 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGG 81378 | | | || ||||| |||||||| |||| ||||| | || ||| | | Sbjct 900918 CAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTG-TTG 900976 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 || ||||| | || ||||| || || ||| | || | |||||| |||| || || Sbjct 900977 CCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCG 901036 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAA 81498 | || || || || || |||| |||| ||| | | ||||| || Sbjct 901037 TTGGAACAGCCATTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCC 901096 Query 81499 AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATT 81558 | || || || || | | || || || | || || | |||| || || || || Sbjct 901097 ACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTCAGCGTGTCGTAGATC 901156 Query 81559 CCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTT 81618 ||||||||||| || | |||||| | |||| ||| ||||| |||| ||| || || || Sbjct 901157 CCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTG 901216 Query 81619 GAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCA 81678 | || |||||||| || || |||| ||||| |||| | | ||||| ||||| Sbjct 901217 GTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTG 901276 Query 81679 TAGGTTTCCTTGAC-GCGTGGAATAT-CGTCACCGTGAATACCGATAGCTACACGCATAA 81736 ||||| || |||| || | | |||| |||| ||||| || || | ||| || | ||| | Sbjct 901277 TAGGTCTCGATGACTGCTTCG-ATATCCGTC-CCGTGGATTCCCACAGCCACCCTCATGA 901334 Query 81737 ACATGTACTGGGG 81749 ||||| ||| || Sbjct 901335 GCATGTGCTGCGG 901347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570253361831120