Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq232 98.7 2e-15 >seq232 Length=972792 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881 || ||||||||||| |||||||||||||||| |||| ||| ||| ||||| |||||| Sbjct 315330 GGCAGAGGAGGACAGTCTGCTCTGCGTTTTGCTCGACTGAGAATGGAGAAGAGACACAAC 315271 Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTAT---CAAAGACAACAAGTGT 139938 || |||||||||| || |||| || | ||| ||| | ||| |||| |||| | Sbjct 315270 TATGTGAGAAAAGTAGCTGAGACAGCTGTCCAGCTCTTTGTGTCCAATGACA--AAGT-T 315214 Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998 ||| | || || || ||||| || || || || |||||||| | ||| | ||| Sbjct 315213 AATGTGGCAGGAATGGTCTTGGCTGGCTCTGCTGATTTCAAGACTGAACTCAGCCAGTCT 315154 Query 139999 GACTTTTTTGACCC 140012 ||| | ||||| || Sbjct 315153 GACATGTTTGATCC 315140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159033172068365