Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq50 129 5e-25 >seq50 Length=2598561 Score = 129 bits (142), Expect = 5e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || || | ||| || |||||||| || || || || |||||||||||||| || ||| Sbjct 118233 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 118174 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 ||||| | ||||| || |||| | |||||| ||||| ||||| ||||| ||||||| | Sbjct 118173 ACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 118114 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||||| ||||| || | || ||||| || || || ||||| Sbjct 118113 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 118073 Score = 120 bits (132), Expect = 2e-22 Identities = 119/153 (78%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||||||||| || ||||| ||||| ||||| |||||||| |||| ||| Sbjct 117398 AAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCTTCTCTGTCAGTGAAC 117339 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||||| |||||| | || |||||||| |||||||| || || || || || Sbjct 117338 CCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATCCCAGATTTTCACTCCTTTTTCT 117279 Query 30137 GAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30168 || ||||| ||||| ||||| || |||| |||| Sbjct 117278 GACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 117246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406123594137886