Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq696 89.7 4e-13
>seq696
Length=192186
Score = 89.7 bits (98), Expect = 4e-13
Identities = 164/238 (69%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGTGAATTATC 19030
|||| || ||||| || || | | || ||||| ||||| ||| | ||| || | ||
Sbjct 54346 ATGGCGCTGCCTCCCTGCCATGCCCTGTGCCAGTTCTACGTGTGCGA-CGGCGAGCTGTC 54288
Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090
|||||| | |||||| | || || ||||||||||| || || || |||||||| || |
Sbjct 54287 CTGCCAGCTGTACCAGCGCTCTGGCGATATGGGCCTGGGCGTGCCTTTCAACATCGCCAG 54228
Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150
|| || || || || ||||| | ||||| | || ||||| | | || || || |
Sbjct 54227 CTACGCCCTCCTCACGTACATGATCGCGCACATCACGGGACTCCAGCCGGGCGACTTCGT 54168
Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAG 19208
|| || |||| || || || | ||| | || || || || | || |||||||||
Sbjct 54167 CCACACGTTGGGCGACGCGCACGTCTACCTCAACCACATGGAACCGTTGAAAGTGCAG 54110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399322013068965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |