Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq696 242 4e-59 >seq696 Length=192186 Score = 242 bits (268), Expect = 4e-59 Identities = 199/242 (82%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 |||| || |||| |||||||||||||||||||||||| |||| ||||| |||||| Sbjct 54117 TTCAACGGTTCCATGTGGTTGAGGTAGACGTGCGCGTCGCCCAACGTGTGGACGAAGTCG 54176 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 || |||| ||| ||||||| ||| |||| |||||| || || |||| ||||||||| ||| Sbjct 54177 CCCGGCTGGAGTCCCGTGATGTGCGCGATCATGTACGTGAGGAGGGCGTAGCTGGCGATG 54236 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC 145860 ||||| ||||| ||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct 54237 TTGAAAGGCACGCCCAGGCCCATATCGCCAGAGCGCTGGTACAGCTGGCAGGACAGCTCG 54296 Query 145861 CCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 ||| | ||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct 54297 CCGTCGCACACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGCGCCATCAGAGGCAGG 54356 Query 145921 TC 145922 || Sbjct 54357 TC 54358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589801108743080