Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq940 105 8e-18
>seq940
Length=7378152
Score = 105 bits (116), Expect = 8e-18
Identities = 177/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| |||||||||| ||| || || | ||| || ||| |||| || ||
Sbjct 5002735 GAACTTCTCAAAGTTCCAGGACACATCATTCCTGCAGACGGGACTCCAGATGATATACTT 5002676
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262
|||||| ||| || | | | ||||||| | || ||| ||| |||||| |||||
Sbjct 5002675 GGGGTCAGTCATCAGGGAGGTGGGGTCGTCGATGGGAAACGGGAGGCTCTCTCGCAGGAA 5002616
Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320
| ||| || || || || |||||| | || || || ||| || |||||| ||
Sbjct 5002615 TGTGAACAGTGGGTGGGCATCCTTGC--CATTCACATCTACCTTTTCCAAGAGCTGGAAC 5002558
Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380
|| |||||| |||| ||||| || ||||||||||||| || || | ||| || ||||
Sbjct 5002557 TTGGGCTCGTAGCCATTCCCGGGTCGGACGTGCTTCAATGACGGGAGGATTTCATTATTC 5002498
Query 83381 TGGGCGTTTTCCTG 83394
| ||| |||||
Sbjct 5002497 CTGTTGTTCTCCTG 5002484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608512362525080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |