Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1486 150 2e-31 seq1473 145 8e-30 seq1247 116 4e-21 >seq1486 Length=661795 Score = 150 bits (166), Expect = 2e-31 Identities = 121/145 (83%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 117024 CCGCCTTC-GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082 |||||| | ||||||||| ||||||| ||||| ||||| |||||| ||||||| || ||| Sbjct 352449 CCGCCTCCAGGCGAGCGCGTGGTGGCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGC 352508 Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142 ||||||||||| || ||||| |||||||||||||| |||||||| || || ||| | Sbjct 352509 TCCTTCGCCGCCATCTTCTGGCTGAAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCC 352568 Query 117143 AACGAGCTCATCTCCAGGGACGAGG 117167 |||||||||||| ||| ||||||| Sbjct 352569 AACGAGCTCATCAGCAGAGACGAGG 352593 Score = 150 bits (166), Expect = 2e-31 Identities = 121/145 (83%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 117024 CCGCCTTC-GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082 |||||| | ||||||||| ||||||| ||||| ||||| |||||| ||||||| || ||| Sbjct 357443 CCGCCTCCAGGCGAGCGCGTGGTGGCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGC 357384 Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142 ||||||||||| || ||||| |||||||||||||| |||||||| || || ||| | Sbjct 357383 TCCTTCGCCGCCATCTTCTGGCTGAAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCC 357324 Query 117143 AACGAGCTCATCTCCAGGGACGAGG 117167 |||||||||||| ||| ||||||| Sbjct 357323 AACGAGCTCATCAGCAGAGACGAGG 357299 Score = 140 bits (154), Expect = 3e-28 Identities = 166/224 (74%), Gaps = 21/224 (9%) Strand=Plus/Plus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| ||||| ||| | ||||| || |||||| | |||||||| |||||||||||||| || Sbjct 352137 GGTGGAGCGCTTCACGCAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCA 352196 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC----- 116917 ||||||||||||||| | |||||||| ||||| |||||||||||| ||| Sbjct 352197 AATCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTACATCAA 352256 Query 116918 ----------GTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGAT 116967 | ||| || | | ||||| | | |||| ||||||||||| ||||| Sbjct 352257 AGACCCCAAAGAGCGGTC-ACTTA-GAGAA--TAC--CTGTTCAACGCCATCGAAACGAT 352310 Query 116968 GCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 |||||| ||||| |||||||||| |||||||| |||||||| Sbjct 352311 GCCGTGTGTCAAGAAGAAGGCCGACTGGGCGCTCAACTGGATCG 352354 Score = 123 bits (136), Expect = 3e-23 Identities = 95/113 (84%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| |||||| || ||||| ||||| || || || || ||||| ||||||| ||| Sbjct 358194 GAGCCTCTGCTGAAGGACAACCCGCGCCGCTTTGTCATCTTTCCCATCCAATACCACGAC 358135 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||||||||||||| |||||||||||||| |||||||||| ||||||||| Sbjct 358134 ATCTGGCGCATGTACAAGAAGGCCGAGGCGTCATTCTGGACCGCCGAGGAGGT 358082 Score = 118 bits (130), Expect = 1e-21 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| |||||| || ||||| ||||| || || || || ||||| ||||||| ||| Sbjct 351753 GAGCCTCTGCTGAAGGACAACCCGCGCCGCTTTGTCATCTTTCCCATCCAATACCACGAC 351812 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||||||||||||| |||||||||||||| |||||||| | ||||||||| Sbjct 351813 ATCTGGCGCATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCCGAGGAGGT 351865 Score = 113 bits (124), Expect = 5e-20 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| ||||| ||| | ||||| || |||||| | |||||||| |||||||||||||| || Sbjct 357810 GGTGGAGCGCTTCACGCAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCA 357751 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||||||||||| | |||||||| ||||| |||||||||||| ||| Sbjct 357750 AATCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTAC 357696 Score = 98.7 bits (108), Expect = 1e-15 Identities = 100/128 (78%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 116679 TCGAGGAGGTGGACCTGTCCAAGGACAC-GAGCGACTGGGAGCGCTTGAACGACAACGAG 116737 ||| | ||||||| |||||||||||||| ||| ||||||| |||| || ||||| Sbjct 351923 TCGTGTAGGTGGATCTGTCCAAGGACACTCAGC-ACTGGGAAGTTCTGAAAGAAGACGAG 351981 Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797 ||||||| |||||| ||||||| || || ||||||||||||||||||||||| Sbjct 351982 AAGTTTTTCATCTCTCACGTGTTGGCCTTCTTTGCGGCCAGCGACGGCATCGTCAACGAA 352041 Query 116798 AATCTGGT 116805 || ||||| Sbjct 352042 AACCTGGT 352049 Score = 98.7 bits (108), Expect = 1e-15 Identities = 100/128 (78%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 116679 TCGAGGAGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAG 116737 ||| | ||||||| |||||||||||||| ||| ||||||| |||| || ||||| Sbjct 358024 TCGTGTAGGTGGATCTGTCCAAGGACACTCAGC-ACTGGGAAGTTCTGAAAGAAGACGAG 357966 Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797 ||||||| |||||| ||||||| || || ||||||||||||||||||||||| Sbjct 357965 AAGTTTTTCATCTCTCACGTGTTGGCCTTCTTTGCGGCCAGCGACGGCATCGTCAACGAA 357906 Query 116798 AATCTGGT 116805 || ||||| Sbjct 357905 AACCTGGT 357898 >seq1473 Length=2736273 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || ||||| |||||||| |||||| | || || || | || Sbjct 1453374 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAGT 1453433 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| ||| ||| | |||| ||||||| |||||||| ||||| || | ||||| Sbjct 1453434 GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453493 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || |||||||| || || || | ||||||||| ||||||||| Sbjct 1453494 CAGAGGTTGATATTTGCTGGCAAACAACTCGAAGATGGCCGCACCCTCTCTGACTACAAC 1453553 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || ||||| || ||||| || | || ||| Sbjct 1453554 ATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453601 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||||||||||||| | || || || | || Sbjct 1452690 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAGGACAGT 1452749 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || ||| |||||| ||||||| |||||||| ||||| || | |||||| Sbjct 1452750 GACACTGTTGAAAATGTCAAGGTGAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAG 1452809 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || |||||||| ||||| || | ||||||||| ||||||||| Sbjct 1452810 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGACTACAAC 1452869 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| || ||||| || |||| || | || ||| Sbjct 1452870 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1452917 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||||| ||||| ||||||||| |||| || || | Sbjct 2590405 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2590346 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | | | |||| | ||||| | ||||| || ||||| || | || Sbjct 2590345 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCACCTGA 2590286 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | | |||| || || || |||||||| |||| ||||| ||| ||||| Sbjct 2590285 CCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACTCTCTCTGACTA 2590226 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| |||| || ||||| || |||| | ||||| ||| Sbjct 2590225 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2590174 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 |||||||||||| || || || || || || ||||| ||||||||| | || || |||| Sbjct 1452230 AAAAATGCAAATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAAGG 1452289 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| || | | | || | ||||| | ||||| || || || || | || Sbjct 1452290 CAGTGACACTGTTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCTCCTGA 1452349 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | | |||| || ||||||||| |||| || | ||||||||| ||||| Sbjct 1452350 TCAGCAAAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGCACCCTCTCTGACTA 1452409 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||| |||| || ||||| || |||| |||| || || Sbjct 1452410 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 1452460 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||||| ||||| ||||||||| |||| || || | Sbjct 2587498 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2587557 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | | | |||| | ||||| | ||||| || ||||| ||| | || Sbjct 2587558 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGA 2587617 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | | || | || || || |||||||| || | ||||| ||| ||||| Sbjct 2587618 CCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACGCTCTCAGACTA 2587677 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| |||| || ||||| || |||| | ||||| ||| Sbjct 2587678 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2587729 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || ||||| ||||| ||||||||| | || || ||||||| Sbjct 1454742 ATGCAGTTGTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAAGCCAAT 1454801 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | || | | |||||| ||||| | ||||| || || || ||| | ||||| Sbjct 1454802 GATACAGTTGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGTATTCCCCCTGACCAA 1454861 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | || |||| || || || ||||| || || | || |||||| || |||||| Sbjct 1454862 CAAAGGCTGATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGTACCCTCTCTGATTACAAC 1454921 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||||| ||||| ||||| || |||| Sbjct 1454922 ATCCAAAAGGAGGCTACGCTTCATCTCGTCCTGCG 1454956 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| ||||| || |||||| | || || ||| ||| Sbjct 2587958 ATGCAGATCTTCGTGAAGACGCTCACTGGCAAGACAATCACCCTTGAGGTTGAACCCAGT 2588017 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||| | ||||| || ||||| ||| | |||||| Sbjct 2588018 GACACCATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2588077 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| || || || || | ||||| || ||||||||| Sbjct 2588078 CAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGCACACTGTCAGACTACAAC 2588137 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| |||||| |||| || ||||| || |||| || | || ||| Sbjct 2588138 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGTGGTGGC 2588185 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || || || ||||| ||| |||| | || || || | | Sbjct 1453146 ATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACCGTCACTCTTGAGGTTGAGGGGAGT 1453205 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | |||| ||||| | |||||||| ||||| || | ||||| Sbjct 1453206 GACACAGTTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453265 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || |||||||| ||||| || | ||||||||| |||||||||| Sbjct 1453266 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACCCTCTCCGACTACAAC 1453325 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||||||| |||| || ||||| || ||||| || | || ||| Sbjct 1453326 ATTCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453373 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||| ||| | || || ||| ||| Sbjct 2587730 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTTGAACCCAGT 2587789 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||| | ||||| || ||||| ||| | |||||| Sbjct 2587790 GACACCATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2587849 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| || || || || | || || || ||||||||| Sbjct 2587850 CAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGTACACTATCAGACTACAAC 2587909 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || ||||| || |||| | ||||| ||| Sbjct 2587910 ATCCAGAAGGAGTCAACTCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2587957 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || || || ||||| ||| |||| | || || || | | Sbjct 1452918 ATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACCGTCACTCTTGAGGTTGAGGGGAGT 1452977 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | |||| ||||| | |||||||| ||||| || | ||||| Sbjct 1452978 GACACAGTTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453037 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || |||||||| ||||| || | ||| ||||| ||||||||| Sbjct 1453038 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCTCCCTCTCTGACTACAAC 1453097 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || ||||| || ||||| || | || ||| Sbjct 1453098 ATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453145 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || || || ||||| || |||| | || || || | | Sbjct 1453602 ATGCAAATATTTGTGAAGACCCTAACTGGCAAGACTGTCACTCTTGAGGTTGAGGGGAGT 1453661 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || | |||| | |||| ||||||| |||||||| ||||| || | ||||| Sbjct 1453662 GATACTGTTGAGAACG-TGAAGGCCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCA 1453720 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | || | || |||||||| ||||| || | || |||||| |||||||| Sbjct 1453721 ACAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGACGGACCCTCTCTGACTACAA 1453780 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || ||||| || |||| || | || ||| Sbjct 1453781 CATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1453829 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || ||||| || || ||||| ||||||||| | || || || | | Sbjct 1453830 ATGCAGATATTTGTGAAAACCCTTACTGGCAAGACCATCACCCTTGAAGTTGAGGGAAGT 1453889 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | |||| ||||| | ||||| || ||||| || | ||||| Sbjct 1453890 GACACTGTTGAGAATGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCTCCTGACCAA 1453949 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || |||||||| ||||| || | ||||| ||| ||||||||| Sbjct 1453950 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1454009 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| |||| || ||||| || |||| || | || ||| Sbjct 1454010 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1454057 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || ||||| || ||||| | || ||||| | | Sbjct 1454286 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGCCCGTCACCCTTGAGGTCGAGACTAGT 1454345 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | |||||| |||| | ||||| || ||||| ||| | |||||| Sbjct 1454346 GACACTGTTGAGAATGTCAAGGCCCAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 1454405 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || ||||| | ||||| || || | |||||| || |||||| Sbjct 1454406 CAGAGGTTGATATTTGCCGGCAAGCCACTGGAAGATGACCAAACCCTCTCTGATTACAAC 1454465 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || || | || |||| ||||| || ||| Sbjct 1454466 ATCCAGAAGGAGTCCACCCTCCACCATGTCCTGCGTTTGAGAGGTGGC 1454513 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || ||||| || || || ||||| || |||| | || || || | | Sbjct 1452461 AATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACTGTCACTCTTGAGGTTGAGGGGAG 1452520 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || | | | |||| ||||| | |||| || ||||| || | ||||| Sbjct 1452521 TGATACTGTTGAGAATATGAAGGCCAAAATCCAGTACAAGGAAGGCATTCCACCTGACCA 1452580 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | || | ||| |||||||| |||| || | ||||||||| |||||||| Sbjct 1452581 ACAGAGGTTGATATTCGCTGGCAAACAATTGGAAGATGGCCGCACCCTCTCTGACTACAA 1452640 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || ||||| || ||||| || | || ||| Sbjct 1452641 CATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1452689 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || ||||| ||||| ||||||||| | || ||||| | || Sbjct 1454058 ATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGGGCAGT 1454117 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| || | | | |||| ||||| | ||||| || ||||| ||| | || ||| Sbjct 1454118 GACACTGTTGAGAATGTGAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 1454177 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || || | || || | |||||| | ||||||||| Sbjct 1454178 CAGAGGTTGATCTTTGCTGGTAAGCAATTAGAAGATGGACGCACCTTATCTGACTACAAC 1454237 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| || ||| | || || ||||| || |||| || | || ||| Sbjct 1454238 ATCCAAAAAGAGTCTACCCTTCATCTTGTCCTGCGTCTGCGAGGTGGC 1454285 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||| || ||||| | || ||||| | || Sbjct 1454514 ATGCAGATCTTTGTGAAAACCCTAACTGGCAAGACAATCACTCTTGAGGTCGAGGGCAGT 1454573 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | || | | |||| | ||||| ||||| || || || || | | || Sbjct 1454574 GATACTGTTGAGAATGTCAAAGCCAAAATCAAAGACAAGGAAGGTATTCCGCCTCATCAC 1454633 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||||||||||| || ||||||||| ||||||||| Sbjct 1454634 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGGATGTGATCGCACCCTCTCTGACTACAAC 1454693 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| ||||| || || || ||||| || |||| ||||| || ||| Sbjct 1454694 ATCCAAAAGGAAGCTACTCTTCATCTTGTCCTGCGTTTGAGAGGTGGC 1454741 >seq1247 Length=1231281 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 117034 CGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093 |||||| || ||||| || || || || |||||| ||||||| || ||| |||||||| Sbjct 216483 CGAGCGACTTGTGGCTTTTGCAGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGC 216424 Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153 ||| | ||| | |||||| | ||||||||||||||||| || | | |||||||||||| Sbjct 216423 CATCTACTGGTTGAAGAAAAGAGGCCTCATGCCCGGCCTCACCTACTCCAACGAGCTCAT 216364 Query 117154 CTCCAGGGACGAGG 117167 | | ||||||||| Sbjct 216363 CAGCCGGGACGAGG 216350 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| ||||| || ||||||||| | || ||||| ||||||||||| || |||| || Sbjct 219083 GAGCCTCTGCTCCGAGAGAACCCCAGACGCTTCGTCATTTTCCCCATCCAGTACCTCGAA 219024 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 ||||| |||||||| ||||| |||| || || ||||| || || ||||| Sbjct 219023 GTGTGGAAGATGTACAAGCAGGCCCAGGCTTCCTTTTGGACAGTGGAAGAGGT 218971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514978483149520