Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1486 150 2e-31
seq1473 145 8e-30
seq1247 116 4e-21
>seq1486
Length=661795
Score = 150 bits (166), Expect = 2e-31
Identities = 121/145 (83%), Gaps = 1/145 (1%)
Strand=Plus/Plus
Query 117024 CCGCCTTC-GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082
|||||| | ||||||||| ||||||| ||||| ||||| |||||| ||||||| || |||
Sbjct 352449 CCGCCTCCAGGCGAGCGCGTGGTGGCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGC 352508
Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142
||||||||||| || ||||| |||||||||||||| |||||||| || || ||| |
Sbjct 352509 TCCTTCGCCGCCATCTTCTGGCTGAAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCC 352568
Query 117143 AACGAGCTCATCTCCAGGGACGAGG 117167
|||||||||||| ||| |||||||
Sbjct 352569 AACGAGCTCATCAGCAGAGACGAGG 352593
Score = 150 bits (166), Expect = 2e-31
Identities = 121/145 (83%), Gaps = 1/145 (1%)
Strand=Plus/Minus
Query 117024 CCGCCTTC-GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082
|||||| | ||||||||| ||||||| ||||| ||||| |||||| ||||||| || |||
Sbjct 357443 CCGCCTCCAGGCGAGCGCGTGGTGGCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGC 357384
Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142
||||||||||| || ||||| |||||||||||||| |||||||| || || ||| |
Sbjct 357383 TCCTTCGCCGCCATCTTCTGGCTGAAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCC 357324
Query 117143 AACGAGCTCATCTCCAGGGACGAGG 117167
|||||||||||| ||| |||||||
Sbjct 357323 AACGAGCTCATCAGCAGAGACGAGG 357299
Score = 140 bits (154), Expect = 3e-28
Identities = 166/224 (74%), Gaps = 21/224 (9%)
Strand=Plus/Plus
Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862
||| ||||| ||| | ||||| || |||||| | |||||||| |||||||||||||| ||
Sbjct 352137 GGTGGAGCGCTTCACGCAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCA 352196
Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC----- 116917
||||||||||||||| | |||||||| ||||| |||||||||||| |||
Sbjct 352197 AATCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTACATCAA 352256
Query 116918 ----------GTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGAT 116967
| ||| || | | ||||| | | |||| ||||||||||| |||||
Sbjct 352257 AGACCCCAAAGAGCGGTC-ACTTA-GAGAA--TAC--CTGTTCAACGCCATCGAAACGAT 352310
Query 116968 GCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011
|||||| ||||| |||||||||| |||||||| ||||||||
Sbjct 352311 GCCGTGTGTCAAGAAGAAGGCCGACTGGGCGCTCAACTGGATCG 352354
Score = 123 bits (136), Expect = 3e-23
Identities = 95/113 (84%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||| |||||| || ||||| ||||| || || || || ||||| ||||||| |||
Sbjct 358194 GAGCCTCTGCTGAAGGACAACCCGCGCCGCTTTGTCATCTTTCCCATCCAATACCACGAC 358135
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||||||||||||| |||||||||||||| |||||||||| |||||||||
Sbjct 358134 ATCTGGCGCATGTACAAGAAGGCCGAGGCGTCATTCTGGACCGCCGAGGAGGT 358082
Score = 118 bits (130), Expect = 1e-21
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||| |||||| || ||||| ||||| || || || || ||||| ||||||| |||
Sbjct 351753 GAGCCTCTGCTGAAGGACAACCCGCGCCGCTTTGTCATCTTTCCCATCCAATACCACGAC 351812
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||||||||||||| |||||||||||||| |||||||| | |||||||||
Sbjct 351813 ATCTGGCGCATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCCGAGGAGGT 351865
Score = 113 bits (124), Expect = 5e-20
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862
||| ||||| ||| | ||||| || |||||| | |||||||| |||||||||||||| ||
Sbjct 357810 GGTGGAGCGCTTCACGCAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCA 357751
Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||||||||||| | |||||||| ||||| |||||||||||| |||
Sbjct 357750 AATCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTAC 357696
Score = 98.7 bits (108), Expect = 1e-15
Identities = 100/128 (78%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 116679 TCGAGGAGGTGGACCTGTCCAAGGACAC-GAGCGACTGGGAGCGCTTGAACGACAACGAG 116737
||| | ||||||| |||||||||||||| ||| ||||||| |||| || |||||
Sbjct 351923 TCGTGTAGGTGGATCTGTCCAAGGACACTCAGC-ACTGGGAAGTTCTGAAAGAAGACGAG 351981
Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797
||||||| |||||| ||||||| || || |||||||||||||||||||||||
Sbjct 351982 AAGTTTTTCATCTCTCACGTGTTGGCCTTCTTTGCGGCCAGCGACGGCATCGTCAACGAA 352041
Query 116798 AATCTGGT 116805
|| |||||
Sbjct 352042 AACCTGGT 352049
Score = 98.7 bits (108), Expect = 1e-15
Identities = 100/128 (78%), Gaps = 2/128 (2%)
Strand=Plus/Minus
Query 116679 TCGAGGAGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAG 116737
||| | ||||||| |||||||||||||| ||| ||||||| |||| || |||||
Sbjct 358024 TCGTGTAGGTGGATCTGTCCAAGGACACTCAGC-ACTGGGAAGTTCTGAAAGAAGACGAG 357966
Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797
||||||| |||||| ||||||| || || |||||||||||||||||||||||
Sbjct 357965 AAGTTTTTCATCTCTCACGTGTTGGCCTTCTTTGCGGCCAGCGACGGCATCGTCAACGAA 357906
Query 116798 AATCTGGT 116805
|| |||||
Sbjct 357905 AACCTGGT 357898
>seq1473
Length=2736273
Score = 145 bits (160), Expect = 8e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || || ||||| |||||||| |||||| | || || || | ||
Sbjct 1453374 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAGT 1453433
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| ||| ||| | |||| ||||||| |||||||| ||||| || | |||||
Sbjct 1453434 GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453493
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || |||||||| || || || | ||||||||| |||||||||
Sbjct 1453494 CAGAGGTTGATATTTGCTGGCAAACAACTCGAAGATGGCCGCACCCTCTCTGACTACAAC 1453553
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || ||||| || ||||| || | || |||
Sbjct 1453554 ATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453601
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||||||||||||| | || || || | ||
Sbjct 1452690 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAGGACAGT 1452749
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || ||| |||||| ||||||| |||||||| ||||| || | ||||||
Sbjct 1452750 GACACTGTTGAAAATGTCAAGGTGAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAG 1452809
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || |||||||| ||||| || | ||||||||| |||||||||
Sbjct 1452810 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGACTACAAC 1452869
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||| ||| |||| || ||||| || |||| || | || |||
Sbjct 1452870 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1452917
Score = 131 bits (144), Expect = 2e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || || || ||||| ||||| ||||||||| |||| || || |
Sbjct 2590405 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2590346
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|| |||| | | | |||| | ||||| | ||||| || ||||| || | ||
Sbjct 2590345 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCACCTGA 2590286
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | | |||| || || || |||||||| |||| ||||| ||| |||||
Sbjct 2590285 CCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACTCTCTCTGACTA 2590226
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||||||| |||| || ||||| || |||| | ||||| |||
Sbjct 2590225 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2590174
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
|||||||||||| || || || || || || ||||| ||||||||| | || || ||||
Sbjct 1452230 AAAAATGCAAATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAAGG 1452289
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|| |||| || | | | || | ||||| | ||||| || || || || | ||
Sbjct 1452290 CAGTGACACTGTTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCTCCTGA 1452349
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | | |||| || ||||||||| |||| || | ||||||||| |||||
Sbjct 1452350 TCAGCAAAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGCACCCTCTCTGACTA 1452409
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| ||| |||| || ||||| || |||| |||| || ||
Sbjct 1452410 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 1452460
Score = 125 bits (138), Expect = 7e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || || || ||||| ||||| ||||||||| |||| || || |
Sbjct 2587498 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2587557
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|| |||| | | | |||| | ||||| | ||||| || ||||| ||| | ||
Sbjct 2587558 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGA 2587617
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | | || | || || || |||||||| || | ||||| ||| |||||
Sbjct 2587618 CCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACGCTCTCAGACTA 2587677
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||||||| |||| || ||||| || |||| | ||||| |||
Sbjct 2587678 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2587729
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| | || || || || ||||| ||||| ||||||||| | || || |||||||
Sbjct 1454742 ATGCAGTTGTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAAGCCAAT 1454801
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | || | | |||||| ||||| | ||||| || || || ||| | |||||
Sbjct 1454802 GATACAGTTGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGTATTCCCCCTGACCAA 1454861
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | || |||| || || || ||||| || || | || |||||| || ||||||
Sbjct 1454862 CAAAGGCTGATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGTACCCTCTCTGATTACAAC 1454921
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| |||||||| ||||| ||||| || ||||
Sbjct 1454922 ATCCAAAAGGAGGCTACGCTTCATCTCGTCCTGCG 1454956
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || |||||||| ||||| || |||||| | || || ||| |||
Sbjct 2587958 ATGCAGATCTTCGTGAAGACGCTCACTGGCAAGACAATCACCCTTGAGGTTGAACCCAGT 2588017
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| | ||||| | ||||| || ||||| ||| | ||||||
Sbjct 2588018 GACACCATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2588077
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || ||||| || || || || | ||||| || |||||||||
Sbjct 2588078 CAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGCACACTGTCAGACTACAAC 2588137
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| |||||| |||| || ||||| || |||| || | || |||
Sbjct 2588138 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGTGGTGGC 2588185
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || ||||| || || || ||||| ||| |||| | || || || | |
Sbjct 1453146 ATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACCGTCACTCTTGAGGTTGAGGGGAGT 1453205
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | | |||| ||||| | |||||||| ||||| || | |||||
Sbjct 1453206 GACACAGTTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453265
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || |||||||| ||||| || | ||||||||| ||||||||||
Sbjct 1453266 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACCCTCTCCGACTACAAC 1453325
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| ||||||||| |||| || ||||| || ||||| || | || |||
Sbjct 1453326 ATTCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453373
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| ||||| ||| | || || ||| |||
Sbjct 2587730 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTTGAACCCAGT 2587789
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| | ||||| | ||||| || ||||| ||| | ||||||
Sbjct 2587790 GACACCATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2587849
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || ||||| || || || || | || || || |||||||||
Sbjct 2587850 CAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGTACACTATCAGACTACAAC 2587909
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || || ||||| || |||| | ||||| |||
Sbjct 2587910 ATCCAGAAGGAGTCAACTCTCCATCTTGTCCTGCGTCTCAGGGGTGGC 2587957
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || ||||| || || || ||||| ||| |||| | || || || | |
Sbjct 1452918 ATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACCGTCACTCTTGAGGTTGAGGGGAGT 1452977
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | | |||| ||||| | |||||||| ||||| || | |||||
Sbjct 1452978 GACACAGTTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453037
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || |||||||| ||||| || | ||| ||||| |||||||||
Sbjct 1453038 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCTCCCTCTCTGACTACAAC 1453097
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || ||||| || ||||| || | || |||
Sbjct 1453098 ATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1453145
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || || || || ||||| || |||| | || || || | |
Sbjct 1453602 ATGCAAATATTTGTGAAGACCCTAACTGGCAAGACTGTCACTCTTGAGGTTGAGGGGAGT 1453661
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | || | |||| | |||| ||||||| |||||||| ||||| || | |||||
Sbjct 1453662 GATACTGTTGAGAACG-TGAAGGCCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCA 1453720
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | | || | || |||||||| ||||| || | || |||||| ||||||||
Sbjct 1453721 ACAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGACGGACCCTCTCTGACTACAA 1453780
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || ||||| || |||| || | || |||
Sbjct 1453781 CATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1453829
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || ||||| || || ||||| ||||||||| | || || || | |
Sbjct 1453830 ATGCAGATATTTGTGAAAACCCTTACTGGCAAGACCATCACCCTTGAAGTTGAGGGAAGT 1453889
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | | |||| ||||| | ||||| || ||||| || | |||||
Sbjct 1453890 GACACTGTTGAGAATGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCTCCTGACCAA 1453949
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || |||||||| ||||| || | ||||| ||| |||||||||
Sbjct 1453950 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1454009
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| |||| || ||||| || |||| || | || |||
Sbjct 1454010 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGCGAGGTGGC 1454057
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || || || ||||| || ||||| | || ||||| | |
Sbjct 1454286 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGCCCGTCACCCTTGAGGTCGAGACTAGT 1454345
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | |||||| |||| | ||||| || ||||| ||| | ||||||
Sbjct 1454346 GACACTGTTGAGAATGTCAAGGCCCAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 1454405
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | || | || ||||| | ||||| || || | |||||| || ||||||
Sbjct 1454406 CAGAGGTTGATATTTGCCGGCAAGCCACTGGAAGATGACCAAACCCTCTCTGATTACAAC 1454465
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || || | || |||| ||||| || |||
Sbjct 1454466 ATCCAGAAGGAGTCCACCCTCCACCATGTCCTGCGTTTGAGAGGTGGC 1454513
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || ||||| || || || ||||| || |||| | || || || | |
Sbjct 1452461 AATGCAGATCTTTGTAAAGACCCTAACTGGCAAGACTGTCACTCTTGAGGTTGAGGGGAG 1452520
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | || | | | |||| ||||| | |||| || ||||| || | |||||
Sbjct 1452521 TGATACTGTTGAGAATATGAAGGCCAAAATCCAGTACAAGGAAGGCATTCCACCTGACCA 1452580
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | | || | ||| |||||||| |||| || | ||||||||| ||||||||
Sbjct 1452581 ACAGAGGTTGATATTCGCTGGCAAACAATTGGAAGATGGCCGCACCCTCTCTGACTACAA 1452640
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || ||||| || ||||| || | || |||
Sbjct 1452641 CATCCAGAAGGAGTCCACCCTCCATCTTGTCTTGCGTCTGCGAGGTGGC 1452689
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || ||||| || ||||| ||||| ||||||||| | || ||||| | ||
Sbjct 1454058 ATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGGGCAGT 1454117
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| || | | | |||| ||||| | ||||| || ||||| ||| | || |||
Sbjct 1454118 GACACTGTTGAGAATGTGAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 1454177
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || || | || || | |||||| | |||||||||
Sbjct 1454178 CAGAGGTTGATCTTTGCTGGTAAGCAATTAGAAGATGGACGCACCTTATCTGACTACAAC 1454237
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| || ||| | || || ||||| || |||| || | || |||
Sbjct 1454238 ATCCAAAAAGAGTCTACCCTTCATCTTGTCCTGCGTCTGCGAGGTGGC 1454285
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || ||||| || ||||| | || ||||| | ||
Sbjct 1454514 ATGCAGATCTTTGTGAAAACCCTAACTGGCAAGACAATCACTCTTGAGGTCGAGGGCAGT 1454573
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | || | | |||| | ||||| ||||| || || || || | | ||
Sbjct 1454574 GATACTGTTGAGAATGTCAAAGCCAAAATCAAAGACAAGGAAGGTATTCCGCCTCATCAC 1454633
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || ||||||||||||| || ||||||||| |||||||||
Sbjct 1454634 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGGATGTGATCGCACCCTCTCTGACTACAAC 1454693
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| ||||| || || || ||||| || |||| ||||| || |||
Sbjct 1454694 ATCCAAAAGGAAGCTACTCTTCATCTTGTCCTGCGTTTGAGAGGTGGC 1454741
>seq1247
Length=1231281
Score = 116 bits (128), Expect = 4e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 117034 CGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093
|||||| || ||||| || || || || |||||| ||||||| || ||| ||||||||
Sbjct 216483 CGAGCGACTTGTGGCTTTTGCAGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGC 216424
Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153
||| | ||| | |||||| | ||||||||||||||||| || | | ||||||||||||
Sbjct 216423 CATCTACTGGTTGAAGAAAAGAGGCCTCATGCCCGGCCTCACCTACTCCAACGAGCTCAT 216364
Query 117154 CTCCAGGGACGAGG 117167
| | |||||||||
Sbjct 216363 CAGCCGGGACGAGG 216350
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||| ||||| || ||||||||| | || ||||| ||||||||||| || |||| ||
Sbjct 219083 GAGCCTCTGCTCCGAGAGAACCCCAGACGCTTCGTCATTTTCCCCATCCAGTACCTCGAA 219024
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
||||| |||||||| ||||| |||| || || ||||| || || |||||
Sbjct 219023 GTGTGGAAGATGTACAAGCAGGCCCAGGCTTCCTTTTGGACAGTGGAAGAGGT 218971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514978483149520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |