Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 86.0 9e-12
>seq1473
Length=2736273
Score = 86.0 bits (94), Expect = 9e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140
|| |||||||| || || ||||| || || || | || ||| ||||||||||| |||
Sbjct 1455166 GTTGATTCTTTCTGGATGTTGTAATCAGAGAGTGTGCGGCCATCTTCTAATTGTTTGCCA 1455107
Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
||||| ||||| || || ||||| || ||||||||||| || || ||
Sbjct 1455106 GCAAATATCAACCTCTGTTGATCAGGGGGAATTCCTTCCTTGTCCTG 1455060
Score = 84.2 bits (92), Expect = 3e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | | || | ||| | || || ||||| || || || || |
Sbjct 1452462 TTCCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 1452403
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | || ||| || || ||||| |||||||| ||||| ||||||||||| ||||
Sbjct 1452402 AGAGGGTGCGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAACCTTTGCTGATCAGGAG 1452343
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| ||||| || || ||
Sbjct 1452342 GAATACCTTCCTTGTCCTG 1452324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743179015171840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |