Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 468 5e-127
seq1473 111 1e-19
seq354 105 6e-18
seq28210 102 7e-17
seq1486 95.1 1e-14
>seq1148
Length=2189075
Score = 468 bits (518), Expect = 5e-127
Identities = 1038/1551 (67%), Gaps = 39/1551 (3%)
Strand=Plus/Plus
Query 22452 GGTTCAC-CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
|||| || |||| ||| ||||||||| | || | |||| ||| |||||| ||| ||
Sbjct 533086 GGTTGACGCACTGGAA-CTCGCCGGAGAGCACCCTGCGTGTGTATATGTTGCTGGTGTAC 533144
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
| || | || || ||||| || || ||||| || || || ||||| ||||| ||||||
Sbjct 533145 GCCTCAATGGACTCGTTGTTGCCAAGGATCTGCGCAGTGGAGGCGGTGGGCATGGGCGCC 533204
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCC 22630
| ||| || |||||||| |||||||| | || || |||||| | | |||||||
Sbjct 533205 AGCAGCAGGCTGTTTCTCACACCGTGCTTGGCGATCTTCTCCTTGAGTAATGTCCAGTCC 533264
Query 22631 CACAGATCGGACGGCGTCACATTG---TCCCACATATCGTATTGCAACACGCCGCGACTC 22687
||||| |||||| | | | |||||| || || || | | || ||
Sbjct 533265 CACAG------CGGCGTGGGAATCCGCTGCCACATGTCATACTGGAGGATCCCCTTGCTG 533318
Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCC 22747
| || ||| |||||| ||||| || || | ||||| || |||||||| |||
Sbjct 533319 ACAGGAGAGCCCGGGTACGTCTCGTAGGGGCCGTGCTCAGCGGCCAGCTCGCAGCTGGCC 533378
Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCG 22804
|||| |||| |||| || | |||||||||||| | | ||| | || || ||| |
Sbjct 533379 TCCAGCGCGGCGTAGTAGAGAGTCTCGAAGATCTGAATATTGAGTAGTTGCGCCTCGGGG 533438
Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864
|| || | ||| ||||| | | ||| ||||| |||| ||||| ||||| ||
Sbjct 533439 ---CTCTCAAAGGGCTGCCGCATGAGAATGAAGGCGTCGGCCAGCCCCTGGACGCCGATG 533495
Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAA 22924
|| || || |||| || || || | ||||| |||| || || | ||
Sbjct 533496 CCAATGGGCCGGTGGCGCATGTTGGAGCGCTGCGCCTCAGGCACCGGGTAGTAGTTGATG 533555
Query 22925 TCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAG 22984
||||| | ||||| | ||| || | | ||| || | | |||
Sbjct 533556 TCGATGATCCTGTTGAGGTTCTTGACGATGACTTTGGTGACGGCCGCCAGCTTCTTGAAG 533615
Query 22985 TCGTAAA--CGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042
||||| ||| || || || || |||||| || | ||||| || ||||| |
Sbjct 533616 TCGTATGTGCGCTCGGGGGTG--ACGTACATGTTGAGCGCCACGGAGGCTAGGTTGCACA 533673
Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTA 23102
||||||||||||| | | ||||| || || || || || || || ||||| ||||| |
Sbjct 533674 CGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAGGTTGCTGCACTTGA 533733
Query 23103 TCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162
| ||||||| || ||||||||| || |||||||| | ||||||||||||||||||||
Sbjct 533734 TGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTTGTAGAGCATGTACG 533793
Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACAC 23222
||||||||||||| ||| ||||||||||| || ||||| ||| || | ||
Sbjct 533794 GCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTGCTGGGCTTTCACCA 533853
Query 23223 GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
||| | || ||| || | ||| || | |||||| || ||||| || ||||
Sbjct 533854 CCCGCTTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCTCAAACTCATCACCCC 533913
Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342
| || ||| ||||||| || | | | ||||||||||| ||| || | |
Sbjct 533914 AGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACCAGTCCTGGTTGCTCT 533973
Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402
| || | |||| || ||||| || ||||| ||| || ||||||| || |||||||||
Sbjct 533974 CTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAACAGGTCACGGGCGCGCT 534033
Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462
|||||||||||| |||||||| |||| |||| ||||| || | ||| |||||||
Sbjct 534034 GCTCCTCTTTGCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAGATGTCAAAGTGCCACG 534093
Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522
|||| ||||| | ||| || ||||| || | ||| ||||| ||||| || ||||| || |
Sbjct 534094 GCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACGTAGCGCG 534153
Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582
||||||||||||| || | ||||| ||||| || |||||||| ||| ||| |
Sbjct 534154 CCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGTTGGAGTTGCCATTGGTGCCGG 534213
Query 23583 CCACACTCGAACCTTTTGCTCGAAC-GTTG----TGAACGTGGAAACCTATGCCTCCGCC 23637
| | | | || | |||| | || ||| || | || ||||| || |
Sbjct 534214 CGA----TGTAGCTGCCAGTGGAACGGATGCAGCTGACCG-CCACGCCGATGCCACCTGC 534268
Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697
|||||| || || | || || || || || |||||||||||||| ||||||||||| ||
Sbjct 534269 CGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAGATGCCATCGATGCTGTCGTC 534328
Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGA 23753
|| | || | || ||| || |||| || || || | || | || ||
Sbjct 534329 CTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGGTTGGTGC----CAGCGTTGA 534384
Query 23754 ACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGG 23813
| || || || ||||||||| || ||| | || | || |||||||| || ||||
Sbjct 534385 AAAGAGTGGGTGAGGCGTGCGTGAACCATCTCTCTGAAAGCAGGTTGTACGTCTCAATGG 534444
Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
||||||| | | | | ||||| || || | || || ||||||| ||||| || || |
Sbjct 534445 CGGCATCCACGCGCGCGCCGTGGATGCCCACCGCCACCCGCATCAGCATGTGCTGCGGGC 534504
Query 23874 TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAA 23933
||| || |||||| || |||| |||||| || || | || || || || ||||
Sbjct 534505 GCTCTGCCACCTTGCCGTTGATCTTGAGCAGATAGGAGCGCTCCAGGGTCTTGAAGCCAA 534564
Query 23934 AATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984
| | | ||| ||||| || |||| | |||||||| |||| ||||
Sbjct 534565 AGAAATTGTAGGAGAAGTCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGT 534615
Score = 82.4 bits (90), Expect = 7e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|||||||| ||| ||||| |||| ||| ||||| || |||||||| || || ||||||||
Sbjct 532377 CTTGTCCAGTGTGAACTGGATGGGGTTGGCGGCAGGCTTGGTGCGGAGGTAGTACATGCC 532436
Query 22165 CGTCTTCAGACCC 22177
||||||||||||
Sbjct 532437 TGTCTTCAGACCC 532449
>seq1473
Length=2736273
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||||||||| || || || ||||| || || ||||| || |||||| |||| ||||| ||
Sbjct 2590405 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2590346
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|||| | | || | |||||| | ||| ||||||||||||| | || || ||
Sbjct 2590345 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCACCTGA 2590286
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||| | | || || ||||| || ||| |||||||| | ||| | || ||
Sbjct 2590285 CCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACTCTCTCTGACTA 2590226
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| || || || || || || ||||| || || | || ||||| ||
Sbjct 2590225 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2590175
Score = 104 bits (114), Expect = 2e-17
Identities = 119/158 (75%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA--ACCG 31249
|||||| || || || ||||| || || |||||||| |||||| | || ||||| || |
Sbjct 1452689 CATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAGGACAG 1452748
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
| |||| ||| |||| ||||| || ||| |||||| |||||| | || || |||
Sbjct 1452749 T--GACACTGTTGAAAATGTCAAGGTGAAAATTCAGGACAAAGAAGGCATTCCTCCTGAC 1452806
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||| | | ||||| ||||||||||| |||||||
Sbjct 1452807 CAGCAGAGGTTGATATTTGCTGGCAAACAACTGGAAGA 1452844
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || || ||| | || ||||||||
Sbjct 2587729 CATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTTGAACCCAG 2587788
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | |||||| | ||| ||||||||||||| | || || |||||
Sbjct 2587789 TGACACCATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 2587848
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTA 31368
|||| | | || || |||||||| || | ||||| | || ||||| | || ||
Sbjct 2587849 GCAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGTA-CACTATCA--GACTA 2587905
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| || || || || ||||| ||||| || || | || ||||| ||
Sbjct 2587906 CAACATCCAGAAGGAGTCAACTCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2587956
Score = 98.7 bits (108), Expect = 9e-16
Identities = 164/234 (70%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||||||||| || || || ||||| || || ||||| || |||||| |||| ||||| ||
Sbjct 2587498 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2587557
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|||| | | || | |||||| | ||| ||||||||||||| | || || ||
Sbjct 2587558 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGA 2587617
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGA 31365
||||||| | | || || ||||| || ||| ||||||| | | | || | | ||
Sbjct 2587618 CCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACG-CTCTCA--GA 2587674
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || || || || || || ||||| || || | || ||||| ||
Sbjct 2587675 CTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2587728
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/234 (70%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA- 31246
|||| |||||||| || || ||||| || || ||||| || |||||| | || ||||||
Sbjct 1452229 CAAAAATGCAAATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAAG 1452288
Query 31247 -CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305
| || |||| ||| || | || ||| | ||| |||||||||||| | || ||
Sbjct 1452289 GCAGT--GACACTGTTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCTCC 1452346
Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365
|| ||||| | | || || |||||||||||||||||||| || | ||
Sbjct 1452347 TGATCAGCAAAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGCACCCTCTCTGA 1452406
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || ||||| || || || ||||| || || | ||||| || ||
Sbjct 1452407 CTACAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 1452460
Score = 91.5 bits (100), Expect = 1e-13
Identities = 116/158 (73%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA--ACCG 31249
||||||||| || || ||||| || || |||||||| |||||| | || ||||| || |
Sbjct 1453373 CATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAG 1453432
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
| |||| ||| |||| || || | ||| |||||| |||||| | || || |||
Sbjct 1453433 T--GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGAC 1453490
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||| | | ||||| ||||||||||| | |||||
Sbjct 1453491 CAACAGAGGTTGATATTTGCTGGCAAACAACTCGAAGA 1453528
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| | || ||||||||
Sbjct 2587957 CATGCAGATCTTCGTGAAGACGCTCACTGGCAAGACAATCACCCTTGAGGTTGAACCCAG 2588016
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | |||||| | ||| ||||||||||||| | || || |||||
Sbjct 2588017 TGACACCATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 2588076
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | | || || |||||||| || | ||||| || || || || ||
Sbjct 2588077 GCAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGCACACTGTCAGACTACAA 2588136
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| ||||| || || || || ||||| || ||
Sbjct 2588137 CATCCAAAAGGAGTCCACCCTCCATCTTGTCCT 2588169
>seq354
Length=3526367
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| |||||| |||| || || || || ||||| | ||| |||| || || | ||| |
Sbjct 779302 TTTCTACGCGTTTCATGAAGAGGTCTGGGATCCACATAGCAAAGAAAAGGTCTCTGGCCC 779361
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| ||||||||| || |||||||| || || |||| |||||| || || || |||||
Sbjct 779362 TCTGCTCCTCTTTACCCGTGTTCTTCTTTAACTCCAGAAAGTCAAATACATCGAAATGCC 779421
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495
||||||| | ||| || || || || || |||||||
Sbjct 779422 ACGGCTCTAAGTAGACAGCGAATGCACCGGGTCTCT 779457
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| |||||| |||| || || || || ||||| | ||| |||| || || | ||| |
Sbjct 781721 TTTCTACGCGTTTCATGAAGAGGTCTGGGATCCACATAGCAAAGAAAAGGTCTCTGGCCC 781780
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| ||||||||| || |||||||| || || |||| |||||| || || || |||||
Sbjct 781781 TCTGCTCCTCTTTACCCGTGTTCTTCTTTAACTCCAGAAAGTCAAATACATCGAAATGCC 781840
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495
||||||| | ||| || || || || || |||||||
Sbjct 781841 ACGGCTCTAAGTAGACAGCGAATGCACCGGGTCTCT 781876
Score = 104 bits (114), Expect = 2e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| ||||| || ||||| ||||| ||||| || | |||||| | || || ||
Sbjct 778844 ACCTCATCTTTACTGGTATACTCGACAATCTCGGTGCACAAATTGCTGGATTTGATGGTC 778903
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|| | || ||||||||| || | |||||| | |||||||| ||||||||||| |||
Sbjct 778904 CCGAGGTTCTGCTGGTTGCTCTTCCCATTGCAAGCGTCCTTGTACAGCATGTACGGAGTG 778963
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204
||||| || ||| ||||||||||| || |||||
Sbjct 778964 CCCGTTTCAGTCTGGGACTCGATGATGGCGTACCACA 779000
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760
|||| |||||||| || || || || || || ||||| || |||||||| ||| |||
Sbjct 777633 CGTAGGTTTCGTAAGGCCCCAATTCAGCCGCTAGCTCGCAACTGGCCTCCAAAGCGGCGT 777692
Query 22761 AATATATAGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817
| || || ||||||||||||| | ||| ||| | ||| | || |||||| |||
Sbjct 777693 AGTAGATGGTCTCGAAGATTTGGGTGTTGAGCAACTGGGCTTC-CCG--GCTTTCAAACG 777749
Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877
| |||||||| | ||| || || || | ||||||||||| || || || || ||||
Sbjct 777750 GGTAACGCATCAGGATGAAGGCATCAGCAAGGCCCTGAACGCCAATTCCTATTGGCCGGT 777809
>seq28210
Length=470
Score = 102 bits (112), Expect = 7e-17
Identities = 218/325 (67%), Gaps = 3/325 (1%)
Strand=Plus/Plus
Query 57538 GATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAG 57597
|||| || || ||||| ||| || | | || | ||| | ||| ||||| || |
Sbjct 125 GATTCGTAATTTTTCCCATTCAACACCACGATTTGTGGGAGTGGTATAAAAAATGTGAGG 184
Query 57598 CATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC- 57656
| | |||||||| | ||||| ||||||| | ||||| |||||| | ||
Sbjct 185 CTTGTTTTTGGACGGCAGAAGAGATAGACCTACACCAAGATCTTTCGGATTGGAACACCA 244
Query 57657 --CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCG 57714
||||| || || | |||| || || || | |||||||||||||| ||||| |
Sbjct 245 AGCTCAATGATGACGAACGCTATTTCATAAAGCATATTTTGGCGTTTTTCGCTGCATCTG 304
Query 57715 ATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGG 57774
|||| || || ||||| ||||||| || | ||| | | || || ||| |||| |
Sbjct 305 ATGGGATCGTGAACGAAAATTTGGCTGAGAATTTTGTAAATGAGGTCCAATATTCGGAAG 364
Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834
||| | || || || |||||| | || || ||| | |||||||||| ||||| |
Sbjct 365 CGAAGTTTTTCTATGGGTTTCAAATCATGATGGAGAACATTCATTCAGAAACTTATTCCC 424
Query 57835 TACTCATCGATACGTACGTGAAGGA 57859
| || || ||||| || ||||||||
Sbjct 425 TTCTGATTGATACCTATGTGAAGGA 449
>seq1486
Length=661795
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 9/200 (5%)
Strand=Plus/Plus
Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812
|| ||||| || |||||||||||| | ||||| ||||| || ||| | ||||| || |||
Sbjct 352153 CAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATGGAGAAC 352212
Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAG 57869
| || || || ||||| || |||||||| || ||| | || || ||| || |
Sbjct 352213 ATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTACATCAAAGACCCCAAAGAGCGG 352272
Query 57870 AAACGTAGA------CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923
|| |||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct 352273 TCACTTAGAGAATACCTGTTCAACGCCATCGAAACGATGCCGTGTGTCAAGAAGAAGGCC 352332
Query 57924 GAGTGGTCAATCAAATGGAT 57943
|| ||| | |||| |||||
Sbjct 352333 GACTGGGCGCTCAACTGGAT 352352
Score = 89.7 bits (98), Expect = 5e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||||||||| || || || ||||| || ||| ||| || || || || ||| ||
Sbjct 352473 GCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTG 352532
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
||||||||||||||||||||||| || || || |||||||
Sbjct 352533 AAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCCAACGAG 352574
Score = 89.7 bits (98), Expect = 5e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||||||||| || || || ||||| || ||| ||| || || || || ||| ||
Sbjct 357419 GCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTG 357360
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
||||||||||||||||||||||| || || || |||||||
Sbjct 357359 AAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCCAACGAG 357318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445558132365840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |