Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1148 468 5e-127 seq1473 111 1e-19 seq354 105 6e-18 seq28210 102 7e-17 seq1486 95.1 1e-14 >seq1148 Length=2189075 Score = 468 bits (518), Expect = 5e-127 Identities = 1038/1551 (67%), Gaps = 39/1551 (3%) Strand=Plus/Plus Query 22452 GGTTCAC-CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 |||| || |||| ||| ||||||||| | || | |||| ||| |||||| ||| || Sbjct 533086 GGTTGACGCACTGGAA-CTCGCCGGAGAGCACCCTGCGTGTGTATATGTTGCTGGTGTAC 533144 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 | || | || || ||||| || || ||||| || || || ||||| ||||| |||||| Sbjct 533145 GCCTCAATGGACTCGTTGTTGCCAAGGATCTGCGCAGTGGAGGCGGTGGGCATGGGCGCC 533204 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCC 22630 | ||| || |||||||| |||||||| | || || |||||| | | ||||||| Sbjct 533205 AGCAGCAGGCTGTTTCTCACACCGTGCTTGGCGATCTTCTCCTTGAGTAATGTCCAGTCC 533264 Query 22631 CACAGATCGGACGGCGTCACATTG---TCCCACATATCGTATTGCAACACGCCGCGACTC 22687 ||||| |||||| | | | |||||| || || || | | || || Sbjct 533265 CACAG------CGGCGTGGGAATCCGCTGCCACATGTCATACTGGAGGATCCCCTTGCTG 533318 Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCC 22747 | || ||| |||||| ||||| || || | ||||| || |||||||| ||| Sbjct 533319 ACAGGAGAGCCCGGGTACGTCTCGTAGGGGCCGTGCTCAGCGGCCAGCTCGCAGCTGGCC 533378 Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCG 22804 |||| |||| |||| || | |||||||||||| | | ||| | || || ||| | Sbjct 533379 TCCAGCGCGGCGTAGTAGAGAGTCTCGAAGATCTGAATATTGAGTAGTTGCGCCTCGGGG 533438 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 || || | ||| ||||| | | ||| ||||| |||| ||||| ||||| || Sbjct 533439 ---CTCTCAAAGGGCTGCCGCATGAGAATGAAGGCGTCGGCCAGCCCCTGGACGCCGATG 533495 Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAA 22924 || || || |||| || || || | ||||| |||| || || | || Sbjct 533496 CCAATGGGCCGGTGGCGCATGTTGGAGCGCTGCGCCTCAGGCACCGGGTAGTAGTTGATG 533555 Query 22925 TCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAG 22984 ||||| | ||||| | ||| || | | ||| || | | ||| Sbjct 533556 TCGATGATCCTGTTGAGGTTCTTGACGATGACTTTGGTGACGGCCGCCAGCTTCTTGAAG 533615 Query 22985 TCGTAAA--CGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042 ||||| ||| || || || || |||||| || | ||||| || ||||| | Sbjct 533616 TCGTATGTGCGCTCGGGGGTG--ACGTACATGTTGAGCGCCACGGAGGCTAGGTTGCACA 533673 Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTA 23102 ||||||||||||| | | ||||| || || || || || || || ||||| ||||| | Sbjct 533674 CGGCCACCTCGTCCTGGCTGGTGTATTCGACGATCTCCGTGCACAGGTTGCTGCACTTGA 533733 Query 23103 TCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162 | ||||||| || ||||||||| || |||||||| | |||||||||||||||||||| Sbjct 533734 TGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCATGCATCCTTGTAGAGCATGTACG 533793 Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACAC 23222 ||||||||||||| ||| ||||||||||| || ||||| ||| || | || Sbjct 533794 GCGTGCCCGTCTCTGTCTGAGACTCGATGATGGCGTACCACACCTGCTGGGCTTTCACCA 533853 Query 23223 GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 ||| | || ||| || | ||| || | |||||| || ||||| || |||| Sbjct 533854 CCCGCTTGACCCGGCCCTCCTTCTCATAGCGTGTGTACAAAGCCTCAAACTCATCACCCC 533913 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342 | || ||| ||||||| || | | | ||||||||||| ||| || | | Sbjct 533914 AGCACTCGTCCAGGCCAGGGCACTCATTTGGACACATGAGCGACCAGTCCTGGTTGCTCT 533973 Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402 | || | |||| || ||||| || ||||| ||| || ||||||| || ||||||||| Sbjct 533974 CTACCCTCTTCATGAACAGATCTGGGATCCAGAGACCGAAGAACAGGTCACGGGCGCGCT 534033 Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462 |||||||||||| |||||||| |||| |||| ||||| || | ||| ||||||| Sbjct 534034 GCTCCTCTTTGCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAGATGTCAAAGTGCCACG 534093 Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522 |||| ||||| | ||| || ||||| || | ||| ||||| ||||| || ||||| || | Sbjct 534094 GCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACGTAGCGCG 534153 Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582 ||||||||||||| || | ||||| ||||| || |||||||| ||| ||| | Sbjct 534154 CCGTGTTGTTGTAGACACGCAGCATGGGCACCAGGCCGTTGGAGTTGCCATTGGTGCCGG 534213 Query 23583 CCACACTCGAACCTTTTGCTCGAAC-GTTG----TGAACGTGGAAACCTATGCCTCCGCC 23637 | | | | || | |||| | || ||| || | || ||||| || | Sbjct 534214 CGA----TGTAGCTGCCAGTGGAACGGATGCAGCTGACCG-CCACGCCGATGCCACCTGC 534268 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 |||||| || || | || || || || || |||||||||||||| ||||||||||| || Sbjct 534269 CGATTTGGAGATGAGGGCACACTGCTTGAGCGTGTCGTAGATGCCATCGATGCTGTCGTC 534328 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGA 23753 || | || | || ||| || |||| || || || | || | || || Sbjct 534329 CTTCATGGCTAGCAGGAAGCAGCTGGACAACTGTGGCCGGTTGGTGC----CAGCGTTGA 534384 Query 23754 ACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGG 23813 | || || || ||||||||| || ||| | || | || |||||||| || |||| Sbjct 534385 AAAGAGTGGGTGAGGCGTGCGTGAACCATCTCTCTGAAAGCAGGTTGTACGTCTCAATGG 534444 Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 ||||||| | | | | ||||| || || | || || ||||||| ||||| || || | Sbjct 534445 CGGCATCCACGCGCGCGCCGTGGATGCCCACCGCCACCCGCATCAGCATGTGCTGCGGGC 534504 Query 23874 TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAA 23933 ||| || |||||| || |||| |||||| || || | || || || || |||| Sbjct 534505 GCTCTGCCACCTTGCCGTTGATCTTGAGCAGATAGGAGCGCTCCAGGGTCTTGAAGCCAA 534564 Query 23934 AATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 | | | ||| ||||| || |||| | |||||||| |||| |||| Sbjct 534565 AGAAATTGTAGGAGAAGTCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGT 534615 Score = 82.4 bits (90), Expect = 7e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 |||||||| ||| ||||| |||| ||| ||||| || |||||||| || || |||||||| Sbjct 532377 CTTGTCCAGTGTGAACTGGATGGGGTTGGCGGCAGGCTTGGTGCGGAGGTAGTACATGCC 532436 Query 22165 CGTCTTCAGACCC 22177 |||||||||||| Sbjct 532437 TGTCTTCAGACCC 532449 >seq1473 Length=2736273 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| || || || ||||| || || ||||| || |||||| |||| ||||| || Sbjct 2590405 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2590346 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||| | | || | |||||| | ||| ||||||||||||| | || || || Sbjct 2590345 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCACCTGA 2590286 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||| | | || || ||||| || ||| |||||||| | ||| | || || Sbjct 2590285 CCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACTCTCTCTGACTA 2590226 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || || || ||||| || || | || ||||| || Sbjct 2590225 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2590175 Score = 104 bits (114), Expect = 2e-17 Identities = 119/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA--ACCG 31249 |||||| || || || ||||| || || |||||||| |||||| | || ||||| || | Sbjct 1452689 CATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAGGACAG 1452748 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 | |||| ||| |||| ||||| || ||| |||||| |||||| | || || ||| Sbjct 1452749 T--GACACTGTTGAAAATGTCAAGGTGAAAATTCAGGACAAAGAAGGCATTCCTCCTGAC 1452806 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| | | ||||| ||||||||||| ||||||| Sbjct 1452807 CAGCAGAGGTTGATATTTGCTGGCAAACAACTGGAAGA 1452844 Score = 102 bits (112), Expect = 7e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || || ||| | || |||||||| Sbjct 2587729 CATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTTGAACCCAG 2587788 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | |||||| | ||| ||||||||||||| | || || ||||| Sbjct 2587789 TGACACCATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 2587848 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTA 31368 |||| | | || || |||||||| || | ||||| | || ||||| | || || Sbjct 2587849 GCAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGTA-CACTATCA--GACTA 2587905 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||| ||||| || || | || ||||| || Sbjct 2587906 CAACATCCAGAAGGAGTCAACTCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2587956 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| || || || ||||| || || ||||| || |||||| |||| ||||| || Sbjct 2587498 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2587557 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||| | | || | |||||| | ||| ||||||||||||| | || || || Sbjct 2587558 CAGTGACACTATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGA 2587617 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGA 31365 ||||||| | | || || ||||| || ||| ||||||| | | | || | | || Sbjct 2587618 CCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACG-CTCTCA--GA 2587674 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || || || || || || ||||| || || | || ||||| || Sbjct 2587675 CTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGG 2587728 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA- 31246 |||| |||||||| || || ||||| || || ||||| || |||||| | || |||||| Sbjct 1452229 CAAAAATGCAAATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAAG 1452288 Query 31247 -CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 | || |||| ||| || | || ||| | ||| |||||||||||| | || || Sbjct 1452289 GCAGT--GACACTGTTGAGAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCTCC 1452346 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || ||||| | | || || |||||||||||||||||||| || | || Sbjct 1452347 TGATCAGCAAAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGCACCCTCTCTGA 1452406 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || ||||| || || || ||||| || || | ||||| || || Sbjct 1452407 CTACAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 1452460 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA--ACCG 31249 ||||||||| || || ||||| || || |||||||| |||||| | || ||||| || | Sbjct 1453373 CATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAG 1453432 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 | |||| ||| |||| || || | ||| |||||| |||||| | || || ||| Sbjct 1453433 T--GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGAC 1453490 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||| | | ||||| ||||||||||| | ||||| Sbjct 1453491 CAACAGAGGTTGATATTTGCTGGCAAACAACTCGAAGA 1453528 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || |||||||| Sbjct 2587957 CATGCAGATCTTCGTGAAGACGCTCACTGGCAAGACAATCACCCTTGAGGTTGAACCCAG 2588016 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| | ||| ||||||||||||| | || || ||||| Sbjct 2588017 TGACACCATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCA 2588076 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||| || | ||||| || || || || || Sbjct 2588077 GCAGAGGTTGATCTTTGCTGGCAAGCAACTAGAAGATGGCCGCACACTGTCAGACTACAA 2588136 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| || || || || ||||| || || Sbjct 2588137 CATCCAAAAGGAGTCCACCCTCCATCTTGTCCT 2588169 >seq354 Length=3526367 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| |||||| |||| || || || || ||||| | ||| |||| || || | ||| | Sbjct 779302 TTTCTACGCGTTTCATGAAGAGGTCTGGGATCCACATAGCAAAGAAAAGGTCTCTGGCCC 779361 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | ||||||||| || |||||||| || || |||| |||||| || || || ||||| Sbjct 779362 TCTGCTCCTCTTTACCCGTGTTCTTCTTTAACTCCAGAAAGTCAAATACATCGAAATGCC 779421 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 ||||||| | ||| || || || || || ||||||| Sbjct 779422 ACGGCTCTAAGTAGACAGCGAATGCACCGGGTCTCT 779457 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| |||||| |||| || || || || ||||| | ||| |||| || || | ||| | Sbjct 781721 TTTCTACGCGTTTCATGAAGAGGTCTGGGATCCACATAGCAAAGAAAAGGTCTCTGGCCC 781780 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | ||||||||| || |||||||| || || |||| |||||| || || || ||||| Sbjct 781781 TCTGCTCCTCTTTACCCGTGTTCTTCTTTAACTCCAGAAAGTCAAATACATCGAAATGCC 781840 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 ||||||| | ||| || || || || || ||||||| Sbjct 781841 ACGGCTCTAAGTAGACAGCGAATGCACCGGGTCTCT 781876 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| ||||| || ||||| ||||| ||||| || | |||||| | || || || Sbjct 778844 ACCTCATCTTTACTGGTATACTCGACAATCTCGGTGCACAAATTGCTGGATTTGATGGTC 778903 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 || | || ||||||||| || | |||||| | |||||||| ||||||||||| ||| Sbjct 778904 CCGAGGTTCTGCTGGTTGCTCTTCCCATTGCAAGCGTCCTTGTACAGCATGTACGGAGTG 778963 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||| || ||| ||||||||||| || ||||| Sbjct 778964 CCCGTTTCAGTCTGGGACTCGATGATGGCGTACCACA 779000 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760 |||| |||||||| || || || || || || ||||| || |||||||| ||| ||| Sbjct 777633 CGTAGGTTTCGTAAGGCCCCAATTCAGCCGCTAGCTCGCAACTGGCCTCCAAAGCGGCGT 777692 Query 22761 AATATATAGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817 | || || ||||||||||||| | ||| ||| | ||| | || |||||| ||| Sbjct 777693 AGTAGATGGTCTCGAAGATTTGGGTGTTGAGCAACTGGGCTTC-CCG--GCTTTCAAACG 777749 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 | |||||||| | ||| || || || | ||||||||||| || || || || |||| Sbjct 777750 GGTAACGCATCAGGATGAAGGCATCAGCAAGGCCCTGAACGCCAATTCCTATTGGCCGGT 777809 >seq28210 Length=470 Score = 102 bits (112), Expect = 7e-17 Identities = 218/325 (67%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 57538 GATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAG 57597 |||| || || ||||| ||| || | | || | ||| | ||| ||||| || | Sbjct 125 GATTCGTAATTTTTCCCATTCAACACCACGATTTGTGGGAGTGGTATAAAAAATGTGAGG 184 Query 57598 CATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC- 57656 | | |||||||| | ||||| ||||||| | ||||| |||||| | || Sbjct 185 CTTGTTTTTGGACGGCAGAAGAGATAGACCTACACCAAGATCTTTCGGATTGGAACACCA 244 Query 57657 --CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCG 57714 ||||| || || | |||| || || || | |||||||||||||| ||||| | Sbjct 245 AGCTCAATGATGACGAACGCTATTTCATAAAGCATATTTTGGCGTTTTTCGCTGCATCTG 304 Query 57715 ATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGG 57774 |||| || || ||||| ||||||| || | ||| | | || || ||| |||| | Sbjct 305 ATGGGATCGTGAACGAAAATTTGGCTGAGAATTTTGTAAATGAGGTCCAATATTCGGAAG 364 Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834 ||| | || || || |||||| | || || ||| | |||||||||| ||||| | Sbjct 365 CGAAGTTTTTCTATGGGTTTCAAATCATGATGGAGAACATTCATTCAGAAACTTATTCCC 424 Query 57835 TACTCATCGATACGTACGTGAAGGA 57859 | || || ||||| || |||||||| Sbjct 425 TTCTGATTGATACCTATGTGAAGGA 449 >seq1486 Length=661795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 9/200 (5%) Strand=Plus/Plus Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812 || ||||| || |||||||||||| | ||||| ||||| || ||| | ||||| || ||| Sbjct 352153 CAGGAAGTTCAGGTGACGGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATGGAGAAC 352212 Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAG 57869 | || || || ||||| || |||||||| || ||| | || || ||| || | Sbjct 352213 ATCCACTCGGAGATGTACAGCCTCCTCATCGACACCTACATCAAAGACCCCAAAGAGCGG 352272 Query 57870 AAACGTAGA------CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 || |||| ||||||||||| |||||||| ||||| || |||||||| Sbjct 352273 TCACTTAGAGAATACCTGTTCAACGCCATCGAAACGATGCCGTGTGTCAAGAAGAAGGCC 352332 Query 57924 GAGTGGTCAATCAAATGGAT 57943 || ||| | |||| ||||| Sbjct 352333 GACTGGGCGCTCAACTGGAT 352352 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || || || ||||| || ||| ||| || || || || ||| || Sbjct 352473 GCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTG 352532 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 ||||||||||||||||||||||| || || || ||||||| Sbjct 352533 AAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCCAACGAG 352574 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || || || ||||| || ||| ||| || || || || ||| || Sbjct 357419 GCTTTCGCCGCCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTG 357360 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 ||||||||||||||||||||||| || || || ||||||| Sbjct 357359 AAGAAACGCGGCCTGATGCCCGGACTCACCTTCTCCAACGAG 357318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445558132365840