Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq696 187 2e-42 >seq696 Length=192186 Score = 187 bits (206), Expect = 2e-42 Identities = 183/236 (78%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || | ||||||| ||| ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 54123 GGTTCCATGTGGTTGAGGTAGACGTGCGCGTCGCCCAACGTGTGGACGAAGTCGCCCGGC 54182 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 || ||||||| ||| ||||||| ||||| ||||||||||||||||||||||| || Sbjct 54183 TGGAGTCCCGTGATGTGCGCGATCATGTACGTGAGGAGGGCGTAGCTGGCGATGTTGAAA 54242 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 || || || |||||||| ||| | || | |||||||||||||||||||||||| || Sbjct 54243 GGCACGCCCAGGCCCATATCGCCAGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCG 54302 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 |||||| ||||| |||| | || || ||||| || |||||| | | ||||| Sbjct 54303 CACACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGCGCCATCAGAGGCAGGTC 54358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427581134262960