Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq467 152 4e-32 >seq467 Length=1063641 Score = 152 bits (168), Expect = 4e-32 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 91816 CTGCAAAGAGGACTACAACATCATCATGGACACTGTCAG-ACAACTGGAACAAAGTGGCT 91874 |||||||||||||| || ||||| | |||||| | ||| ||||| || | || |||| Sbjct 145360 CTGCAAAGAGGACTGCAGGATCATTACGGACACAG-CAGCCCAACTCGAGCTGAGCGGCT 145418 Query 91875 TCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTGG 91934 |||| ||||| ||| |||| || |||||||| || || |||||| | || | | || Sbjct 145419 TCTATTGGGGCCCTCTGGGAGTGGAGGAGGCCCACCGCATGCTGAAAGATTCCCCGCCGG 145478 Query 91935 GCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCACT 91994 |||||| |||||| ||||| ||| |||| ||||| || || ||||||||||| |||||| Sbjct 145479 GCAGCTATCTCATCCGGGACAGCCGGCAGAAGGATGTTTTTTTCACGCTGTCCTATCACG 145538 Query 91995 CTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 | || ||| || ||||| ||| | || || |||||| Sbjct 145539 CCAAGAGCGGGCCGGTCAGCGTGCGCATCGACTACAAG 145576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356071324128931