Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq696 161 7e-35
>seq696
Length=192186
Score = 161 bits (178), Expect = 7e-35
Identities = 177/234 (76%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481
|||| |||||| | ||| | ||||||||||| ||||| |||| |||||||| || ||
Sbjct 54117 TTCAACGGTTCCATGTGGTTGAGGTAGACGTGCGCGTCGCCCAACGTGTGGACGAAGTCG 54176
Query 25482 CCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATG 25541
||||| | || || || | || || ||||||||||||||||| |||||||||||||
Sbjct 54177 CCCGGCTGGAGTCCCGTGATGTGCGCGATCATGTACGTGAGGAGGGCGTAGCTGGCGATG 54236
Query 25542 TTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 25601
|| || || || || | ||||| | | || || | |||||| ||||| || || |||||
Sbjct 54237 TTGAAAGGCACGCCCAGGCCCATAT-CGCCAGAGCGCTGGTACAGCTGGCAGGACAGCTC 54295
Query 25602 TTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
|||||| |||||| ||||| |||| || | ||| ||||| || || || ||
Sbjct 54296 GCCGTCGCACACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGCGCCATCAG 54349
Score = 91.5 bits (100), Expect = 1e-13
Identities = 129/179 (72%), Gaps = 7/179 (4%)
Strand=Plus/Plus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
|||||| ||||||||||| || || | | ||||||||| || ||||| || || |||||
Sbjct 54894 CATGTCGGTGTACTCTGCACCAAAGTGGCGCCACTGGAAGCCATACACGGGACCCAGGTC 54953
Query 25833 TCCATCTTCCCTGTGCTC---AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGC 25889
|| || || | |||| ||||| | ||| |||| ||| | || || || ||
Sbjct 54954 GCCTTCCTCAC---GCTCGGTGAAGCCGCACTTGTCCAGGAAGCTGCGCGAGCCGTTAGC 55010
Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 25948
|||| ||||| || || ||||| || ||||| ||||| || || ||||| ||| |||
Sbjct 55011 AGCCCAAATCTTCACGCCTTTCTCCGACAGCTCCTTGGAATTCGTCGACCC-CTGTCGA 55068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339982656375021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |