Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq822 147 3e-30
seq782 138 2e-27
>seq822
Length=457018
Score = 147 bits (162), Expect = 3e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800
|||||||| | || |||||| || ||||| |||||||| |||||||| | ||||||
Sbjct 363671 TTGACGATGTCGAAGCCCACGCGGCCCCCGAAAGTGCTGGGCTTCCAGTACTCGGGGGAG 363612
Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860
|||||| ||| ||| ||||||||||||||| ||||| || |||| ||| | ||||||
Sbjct 363611 CAGATGGGGTTGCCCAGGAGGCCTTTGAGGGAGAACGGCGCACCCATCTCCACCATGCTC 363552
Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920
|| |||||||||||| |||| | | | |||| || | |||| ||| || || | |
Sbjct 363551 TCGCCGAAGATGGCGCCCAGACGAGTCCTCTCCAGCAGCATGCCGGGGTAAAATTCAAGA 363492
Query 8921 GCCTCGATGTCTCCGTAAA 8939
|| || ||||| |||||||
Sbjct 363491 GCGTCAATGTCGCCGTAAA 363473
>seq782
Length=5188642
Score = 138 bits (152), Expect = 2e-27
Identities = 120/149 (81%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
|||||||| | |||||||| ||| ||||||| ||| | ||||| || | ||||
Sbjct 4107976 ATGAGTCGCGAAGTCTGAAAGAGTCTTTCGTCATCCCAATAAGGATGGACTTGCTTCAAG 4108035
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
|||| |||||||| |||||||||| |||||| || || || |||||||||||||||||
Sbjct 4108036 ACATTGCACACTCGATTGTGTTCCCGGAGCCAAATGGTGGCATACATCATGAGACCAGGG 4108095
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGC 9770
||||||||||||||||| || || |||||
Sbjct 4108096 ACCAGGCCAAAAGCCTCATGGCCCACAGC 4108124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708193768356880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |