Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq9621 84.2 4e-11 >seq9621 Length=220 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 156931 ATTGATATTGTTGCAGTAAACTTATATCCTTTCGCAGAAACAGTTGCTAAACCAGATGTA 156990 || ||||| || | || ||| | |||||||| || | ||| |||||||| |||||| Sbjct 4 ATAGATATGGTCGTCGTTAACCTTTATCCTTTTGCTGCAACGGTTGCTAACCCAGATTGC 63 Query 156991 ACTCTTGCAGATGCAATAGAGAATATTGATATTGGTGGTCCTAGTATGGTGAGATCAGCA 157050 || || || || || || || |||||||||||||| || || | |||||| | || || Sbjct 64 ACCCTAGCTGAAGCGATTGAAAATATTGATATTGGCGGCCCAACTATGGTTCGCTCTGCC 123 Query 157051 GCAAAGAATTATAAGGATGTT 157071 || || ||| || |||||| Sbjct 124 GCTAAAAATCATCGCGATGTT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807177900116120