Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq18074 98.7 4e-16 >seq18074 Length=241 Score = 98.7 bits (108), Expect = 4e-16 Identities = 128/176 (73%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 9402 TGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATCGAC 9461 ||||| |||||||| ||||| | || | || ||||| ||| | || | |||||| Sbjct 16 TGGGACCTGATCATGACCTCCACCTACGATTTTGCTGAGCCGGGCTTCGTGCTGATCGAC 75 Query 9462 CAGATCAACCGCATGAACAATCTCAAGTACTGC---GAGACCATCGCCGCCACCAATCCC 9518 | |||||| | |||||| ||| | || |||| |||| ||||||||| ||| Sbjct 76 CGGATCAATGAGAAGAACAA---CAACTGGTGGACGGAGAACATCCGCGCCACCAACCCC 132 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTCCTTCAACCT 9574 ||||| ||||||||||| || || ||||| |||||||| | |||||| | ||||| Sbjct 133 TGCGGTGAGCAGCCCCTGCCGCCCTACGGCGCCTGCCTGCTCGGCTCCGTGAACCT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203459275512170