Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 89.7 4e-13
>seq1473
Length=2736273
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || | ||||| ||| | || ||| | || || |||| ||
Sbjct 1453374 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACTATCACCCTAGAGGTTGAGGACAGT 1453433
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| | || | || || || ||| |||||||||||||| ||||| || |||
Sbjct 1453434 GACACTGTGGAAAATGTGAAGGTCAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAA 1453493
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||| | | ||||| ||||||||||||| | | | | || || || |||
Sbjct 1453494 CAGAGGTTGATATTTGCTGGCAAACAACTCGAAGATGGCCGCACCCTCTCTGACTACAAC 1453553
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || || ||
Sbjct 1453554 ATCCAGAAGGAGTCCAC 1453570
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||| ||| | || ||| | || || |||| ||
Sbjct 1452690 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAGGACAGT 1452749
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| | || | ||||| || ||| |||||||||||||| ||||| || ||
Sbjct 1452750 GACACTGTTGAAAATGTCAAGGTGAAAATTCAGGACAAAGAAGGCATTCCTCCTGACCAG 1452809
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||| | | ||||| ||||| ||||||| | | | | || || || |||
Sbjct 1452810 CAGAGGTTGATATTTGCTGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGACTACAAC 1452869
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || ||||| || ||
Sbjct 1452870 ATCCAGAAAGAGTCCAC 1452886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429740150313435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |