Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_007809.1 Length=59446 Score E Sequences producing significant alignments: (Bits) Value seq18074 120 1e-22 >seq18074 Length=241 Score = 120 bits (132), Expect = 1e-22 Identities = 136/181 (75%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 35608 GCGC-TGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTT 35666 |||| |||||||| ||||||| | |||| |||| || ||||||||| | || | Sbjct 9 GCGCGTGTGGGACCTGATCATGACCTCCACCTACGATTTTGCTGAGCCGGGCTTCGTGCT 68 Query 35667 CATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACGAA 35726 |||||| |||||| | ||||||| ||||| |||| |||| |||||| || Sbjct 69 GATCGACCGGATCAATGAGAAGAACAACAACTGGTGGACGGAGAACATCCGCGCCACCAA 128 Query 35727 CCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACCT 35786 ||||||||||||||| || || ||||||||||| |||||| || | |||||| | ||||| Sbjct 129 CCCCTGCGGTGAGCAGCCCCTGCCGCCCTACGGCGCCTGCCTGCTCGGCTCCGTGAACCT 188 Query 35787 G 35787 | Sbjct 189 G 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190021221272992