Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq19548 147 2e-30 >seq19548 Length=251 Score = 147 bits (162), Expect = 2e-30 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 168138 GTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTT 168197 |||| || |||||||| || || ||| | | || ||||| |||||||| |||||||| | Sbjct 251 GTGCATACGACTTTGTATCACAAGAATTACGTGCTGCAGAAGATCCAGAATTTGAAACAT 192 Query 168198 TCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACC 168257 ||||||| ||||| || | | || ||||| | ||||| |||||||| || ||| | Sbjct 191 TCTATACAAAAAATATTTTATTAAACGAAGGTATTCGTGCATGGATGGCAGCACAAGATC 132 Query 168258 AACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGAT 168317 ||||||||||||||||||||||||| || || ||||| ||| | || ||||| || | || Sbjct 131 AACCACATGAAAACTTTGTATTCCCTGAGGAGGTATTACCACGTGGAAACGCCCTTTAAT 72 Query 168318 A 168318 | Sbjct 71 A 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566966982119200