Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 102 7e-17
>seq1473
Length=2736273
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || || | ||| | || || ||||| || |||||||| ||
Sbjct 1452919 ATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 1452860
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| |||||||| ||||| | || | | ||| ||||| |||
Sbjct 1452859 GAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGCTGGTCAGGA 1452800
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||| || || | | |||||| ||||| || ||
Sbjct 1452799 GGAATGCCTTCTTTGTCCTGAATTTTCACCTTGACATTTTCAACAGTGTCACTGTCCTCA 1452740
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | |||||||| || || || || ||||| |||||||||
Sbjct 1452739 ACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 1452689
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | ||| || | ||| | || || || || ||||||||||| |||
Sbjct 1453375 ATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCG 1453316
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| |||||||| ||||| | || | | ||||||||| |||
Sbjct 1453315 GAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGA 1453256
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| || || || | | ||||| ||||| | ||
Sbjct 1453255 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCA 1453196
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | || || || ||||| || || || |||||||| |||||||||
Sbjct 1453195 ACCTCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTGCATG 1453145
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | ||| || | ||| | || || || || || |||||||| ||
Sbjct 1453603 ATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 1453544
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| |||||||| ||||| | || | | ||||||||| |||
Sbjct 1453543 GAGAGGGTGCGGCCATCTTCGAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGA 1453484
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||| || || | | ||| || ||||| || ||
Sbjct 1453483 GGAATGCCTTCTTTGTCCTGAATTTTGACCTTCACATTTTCCACAGTGTCACTGTCCTCA 1453424
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | |||||||| || || || || ||||| || ||||||
Sbjct 1453423 ACCTCTAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCATG 1453373
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | || || | ||| | || || || ||||| |||||||| || |
Sbjct 2588184 CCACCACGCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAC 2588125
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || || |||||| ||||| || ||||| |||| | | ||| ||||| || |||
Sbjct 2588124 AGTGTGCGGCCATCTTCTAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 2588065
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|||||||| ||||| || || ||| | | |||| |||||| ||| ||| ||
Sbjct 2588064 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCAACC 2588005
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| | ||| | || ||||| || || || || || || |||||||||
Sbjct 2588004 TCAAGGGTGATTGTCTTGCCAGTGAGCGTCTTCACGAAGATCTGCATG 2587957
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || || | ||| | || ||||| || || |||||||| ||
Sbjct 1454059 ATGCCACCTCGCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCA 1454000
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || |||||| |||||||| ||||| | || | | ||||||||| |||
Sbjct 1453999 GAGAGAGTGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGA 1453940
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| || || || | | ||||| ||||| | ||
Sbjct 1453939 GGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAACAGTGTCACTTCCCTCA 1453880
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| || || ||||| ||||| |||||||||
Sbjct 1453879 ACTTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCATG 1453829
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || || | ||| | ||||| |||||||| |||||||| ||
Sbjct 1454287 ATGCCACCTCGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 1454228
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| | ||| |||||||| |||| | | ||| || || ||
Sbjct 1454227 GATAAGGTGCGTCCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGG 1454168
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| || || || | | ||||| ||||| || |||
Sbjct 1454167 GGAATGCCTTCCTTGTCCTGGATTTTAGCCTTCACATTCTCAACAGTGTCACTGCCCTCG 1454108
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| || || || |||||||| |||||||||
Sbjct 1454107 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCATG 1454057
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || ||||| | || || | ||| | ||||| || ||||| |||||||||||
Sbjct 1454971 ATGCCACCTCGTAGACGCAGGACGAGATGAAGCGTAGCCTCCTTTTGGATGTTGTAATCA 1454912
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| |||||| || || || ||||| |||| || | |||||||| ||
Sbjct 1454911 GAGAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAGCCTTTGTTGGTCAGGG 1454852
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| || || || | | ||||| || || ||| |||
Sbjct 1454851 GGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAACTGTATCATTGGCTTCA 1454792
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| || || || || ||||| | |||||||
Sbjct 1454791 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAACAACTGCATG 1454741
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | ||| || | ||| | || || || || || |||||||| ||
Sbjct 1453147 ATGCCACCTCGCAGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 1453088
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| | || |||||| |||||||| ||||| | || | | ||||||||| |||
Sbjct 1453087 GAGAGGGAGCGGCCATCTTCCAGTTGTTTGCCAGCAAATATCAACCTCTGTTGGTCAGGA 1453028
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| || || || | | ||||| ||||| | ||
Sbjct 1453027 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAACTGTGTCACTCCCCTCA 1452968
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | || || || ||||| || || || |||||||| |||||||||
Sbjct 1452967 ACCTCAAGAGTGACGGTCTTGCCAGTTAGGGTCTTTACAAAGATCTGCATG 1452917
Score = 86.0 bits (94), Expect = 5e-12
Identities = 140/200 (70%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGT--ACGAGAATCTTCAAGTTGTTTAC 114243
|| || || || || |||||||| || | ||||| ||| |||||| ||||| || |
Sbjct 2587926 GTTGACTCCTTCTGGATGTTGTAGTC--TGATAGTGTACGGCCATCTTCTAGTTGCTTGC 2587869
Query 114244 CAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTT 114303
|||| |||| | | ||| ||||| || ||||||||||| ||||| || || ||
Sbjct 2587868 CAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCTT 2587809
Query 114304 TTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAG 114363
| | | || | |||||| ||| ||| || || | ||| | || ||||| || || |
Sbjct 2587808 TGACATTCTCGATGGTGTCACTGGGTTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGGG 2587749
Query 114364 TTTTTACAAAAATCTGCATG 114383
| || || || |||||||||
Sbjct 2587748 TCTTCACGAAGATCTGCATG 2587729
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || | ||| ||| ||||| || || ||||||
Sbjct 2590205 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCTTCCAGCTGCTTACCA 2590264
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | | ||| ||||| || ||||||||||| ||||| || || |||
Sbjct 2590265 GCAAAGATCAACCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTGGCTTTG 2590324
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||| ||| || || || | ||| | || ||||| || || ||
Sbjct 2590325 ACATTCTCAATAGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTC 2590384
Query 114366 TTTACAAAAATCTGCATG 114383
|| ||||| |||||||||
Sbjct 2590385 TTCACAAAGATCTGCATG 2590402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419943015257724
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