Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq696 107 2e-18 >seq696 Length=192186 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||||| ||| || || ||||||||||| | || || || || || || || | || Sbjct 54140 GTAGACGTGCGCGTCGCCCAACGTGTGGACGAAGTCGCCCGGCTGGAGTCCCGTGATGTG 54199 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 || | ||| || || | ||||| |||||||| ||||| ||||| || |||| ||||| Sbjct 54200 CGCGATCATGTACGTGAGGAGGGCGTAGCTGGCGATGTTGAAAGGCACGCCCAGGCCCAT 54259 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 || || || | ||| |||||||| ||||| ||||| ||||| || || || || || Sbjct 54260 ATCGCCAGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCGCACACGTAGAACTGGCA 54319 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCA 20399 | || ||||| || |||||||||| Sbjct 54320 CAGGGCATGGCAGGGAGGCAGCGCCATCA 54348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441166585110680