Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08] 37,377 sequences; 493,775,940 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq14224 89.7 2e-13 >seq14224 Length=230 Score = 89.7 bits (98), Expect = 2e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 42799 GTCGGCCGCGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGAT 42858 ||| | ||||||||| |||| ||| | | ||||||| || || |||||||||| || Sbjct 116 GTCCGGCGCGCCGAAACGCAAGGCATTGAGCGCCGCGACGGGACGGGCGCCCATGGTGAA 57 Query 42859 GATGTCGCGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGAT 42912 || || || | ||| |||||||| ||||||||||| ||||| |||| ||||| Sbjct 56 GACATCCCGCAAGATCCCGCCCACGCCCGTCGCCGCCCCCTGATAGGGTTCGAT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148180600557398